Sequence of DPV Aquareovirus C

Grass carp reovirus segment S8 outer capsid protein VP6 gene, complete cds.

ACC No: AF259053

Dated: 2000-08-02 | Length: 1287 | CRC: -2051904529

                !!NA_SEQUENCE 1.0
ID   AF259053   standard; RNA; VRL; 1287 BP.
XX
AC   AF259053;
XX
SV   AF259053.1
XX
DT   02-AUG-2000 (Rel. 64, Created)
DT   02-AUG-2000 (Rel. 64, Last updated, Version 1)
XX
DE   Grass carp reovirus segment S8 outer capsid protein VP6 gene, complete cds.
XX
KW   .
XX
OS   Grass carp reovirus
OC   Viruses; dsRNA viruses; Reoviridae; Aquareovirus.
XX
RN   [1]
RP   1-1287
RA   Qiu T., Lu R., Zhang J., Zhu Z.;
RT   "Complete nucleotide sequence of grass carp reovirus segment S8";
RL   Unpublished.
XX
RN   [2]
RP   1-1287
RA   Qiu T., Lu R., Zhang J., Zhu Z.;
RT   ;
RL   Submitted (20-APR-2000) to the EMBL/GenBank/DDBJ databases.
RL   Department of Fish Genetics and Breeding, Institute of Hydrobiology,
RL   Chinese Academy of Sciences, Luo Jia Shan, Wuhan, Hubei 430072, China
XX
DR   SPTREMBL; Q9IFX7; Q9IFX7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1287
FT                   /db_xref="taxon:128987"
FT                   /note="GCRV segment: S8"
FT                   /organism="Grass carp reovirus"
FT   CDS             12. .1241
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9IFX7"
FT                   /product="outer capsid protein VP6"
FT                   /protein_id="AAF91354.1"
FT                   /translation="MAQRQFFGLTYNFYGQPAPLFDLNDLQELAGCYARPWTSRFSHLA
FT                   ISTGSLPVWSARYPSVASRNIVVNTLLGAHLNPFAGGQITSHQGITWRDPVLSSLAPVP
FT                   AIQPPPVWAVAENVLLDSNNYPTYVLNLSVCGHKPGCAYYDYVGAFGSGTDLSLEVPVD
FT                   PMPAATTAALMAYIGVPILTSTDSLPLRRPTATITRFNYGLYIRWLSAIWFGSLTGRLN
FT                   RSRTCNGSTSNLRSQRSIQIKPCLSGTMVPDCPPCRRPIILHSMHFPSLAAPNRRVAGA
FT                   LMSQSVTAVTGLPALIDEATLPAWSQGVANLTGNGQGVVPCLDYNPVPMAAARHLQWRQ
FT                   DGLITAAQEAQLNNDYTAYALTIERHLTAMLVANPIAAGRMPIQPFNAADFGQAGQTAA
FT                   AVALAQAMFV"
XX
SQ   Sequence 1287 BP; 268 A; 418 C; 292 G; 309 T; 0 other;

AF259053  Length: 1287  December 21, 2001 14:58  Type: N  Check: 6343  ..

       1  gttattttgt gatggcacag cgtcagtttt tcggactcac ctacaacttt
      51  tacggccaac ccgccccctt atttgactta aacgacttac aagaacttgc
     101  cggttgctac gctcgccctt ggactagccg gttcagccat ttagctatct
     151  ccactggttc tcttccagtc tggtcagccc gataccccag tgttgcatca
     201  cgcaacatcg ttgtcaatac tttgcttggt gcccatctca atccgtttgc
     251  cggtggccaa atcactagcc atcaaggtat cacttggcga gacccagtcc
     301  tatcttcact agctccagtc cctgccattc aaccaccccc agtatgggcg
     351  gtcgccgaaa acgttctttt agattcgaac aattacccca catacgtcct
     401  caatctttcg gtatgtggcc ataaaccagg atgtgcatat tatgactatg
     451  tgggcgcttt cggatcaggg accgatttat cactggaagt accagtggac
     501  ccaatgcccg ctgcgacaac ggctgctttg atggcataca ttggcgtacc
     551  gatcctcact agcacagaca gcctaccgct tcgccggcca actgccacaa
     601  tcacccgatt caactatggt ctctacatcc gttggttgtc cgcaatatgg
     651  ttcgggtccc tgactggacg cctaaaccgc tctcgcactt gcaacggttc
     701  tacttcgaat ttgcgaagcc agcgctcaat ccagatcaag ccgtgcttaa
     751  gtgggacgat ggtgccagac tgccccccct gccgccgccc aatcatctta
     801  cattcgatgc atttcccctc attggcagca ccaaatcgta gagtggcagg
     851  cgccttgatg tcccagtcgg tcaccgccgt aacgggcctc cccgccctca
     901  tagatgaggc caccctcccc gcttggagtc aaggcgttgc taacttgacc
     951  ggtaatggcc aaggcgtggt gccctgcctc gattacaatc ccgttccaat
    1001  ggcagcggcc cgacatttgc aatggcgtca agatggcctt atcaccgctg
    1051  cccaagaggc tcagctcaac aacgattata ccgcatacgc gcttaccatc
    1101  gaacggcatt tgaccgctat gctcgtcgcc aaccccatcg ccgctggtcg
    1151  gatgccaatc cagcccttca acgcagcgga ctttggtcaa gctggacaga
    1201  cggcggccgc tgtcgcatta gcgcaggcga tgttcgtcta actgagacgg
    1251  gctgctcccc cgtctccgct gcctcacgac tttcatc