Sequence of DPV Turnip mosaic virus

Turnip mosaic virus Rorippa indica coat protein gene, partial cds.

ACC No: AF316359

Dated: 2001-02-07 | Length: 867 | CRC: 1330394705

                !!NA_SEQUENCE 1.0
ID   AF316359   standard; RNA; VRL; 867 BP.
XX
AC   AF316359;
XX
SV   AF316359.1
XX
DT   07-FEB-2001 (Rel. 66, Created)
DT   07-FEB-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Turnip mosaic virus Rorippa indica coat protein gene, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-867
RA   Kwon S.J., Choi H.S., Han J.H., La Y.J., Kim K.H.;
RT   "Identification and characterization of plant viruses isolated from weeds
RT   in Korea";
RL   Unpublished.
XX
RN   [2]
RP   1-867
RA   Kwon S.J., Kim K.H.;
RT   ;
RL   Submitted (25-OCT-2000) to the EMBL/GenBank/DDBJ databases.
RL   School of Agricultural Biotechnology, Seoul National University, 103
RL   Seodun-dong, Kwonsun-gu, Suwon 441-744, Korea
XX
DR   SPTREMBL; Q99DD0; Q99DD0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .867
FT                   /country="South Korea"
FT                   /db_xref="taxon:12230"
FT                   /organism="Turnip mosaic virus"
FT                   /specific_host="Rorippa indica"
FT                   /lab_host="Brassica rapa"
FT   CDS             <1. .867
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q99DD0"
FT                   /note="putative"
FT                   /product="coat protein"
FT                   /protein_id="AAK01626.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEREKAEKERERHKQLALKKGKNVA
FT                   QEEGERDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
XX
SQ   Sequence 867 BP; 286 A; 180 C; 234 G; 167 T; 0 other;

AF316359  Length: 867  December 21, 2001 15:30  Type: N  Check: 9517  ..

       1  gcaggtgaga cgcttgatgc aggtttgaca gacgagcaaa agcaggcgga
      51  gaaggagaag aaggagagag agaaggcaga aaaggaacga gagaggcaca
     101  agcagttggc actcaagaaa ggcaagaatg ttgcacaaga agagggagaa
     151  cgcgacaagg aagtaaacgc tggaacctct ggaactttca gtgtacccag
     201  acttaagagt ctgacaagca agatgcgcgt gccaagatac gagcaaagag
     251  tggctttaaa cctcgatcat ctaatcctat acacgccgga gcagacggat
     301  ctatccaaca cacgttcaac gcgaaagcag tttgacacat ggtttgaagg
     351  tgtaatggct gattacgaac tgacggagga caaaatgcaa atcattctca
     401  atggtttaat ggtctggtgc attgagaacg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgcg tttgatttct atgaaatgac ttctagaact ccaatacgtg
     701  cgagagaagc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aacaatttgt tcggcttgga tggaaacgtt ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttaaggg gttatga