Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate QrFC-3 coat protein (CP) gene, partial cds.

ACC No: AF319493

Dated: 2001-02-12 | Length: 1064 | CRC: 1311740844

                !!NA_SEQUENCE 1.0
ID   AF319493   standard; RNA; VRL; 1064 BP.
XX
AC   AF319493;
XX
SV   AF319493.1
XX
DT   12-FEB-2001 (Rel. 66, Created)
DT   12-FEB-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate QrFC-3 coat protein (CP) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1064
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   "Molecular study of Mexican isolates of papaya ringspot potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1064
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   ;
RL   Submitted (02-NOV-2000) to the EMBL/GenBank/DDBJ databases.
RL   Ingenieria Genetica, Cinvestav IPN, Km 9.6 Libramiento Norte Carr.
RL   Irapuato-Leon, Irapuato, Gto Apdo. 629 CP 36500, Mexico
XX
DR   SPTREMBL; Q99C83; Q99C83.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1064
FT                   /country="Mexico: Quintana Roo"
FT                   /db_xref="taxon:12205"
FT                   /virion
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="QrFC-3"
FT   CDS             <1. .858
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q99C83"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAK06729.1"
FT                   /translation="NEAVDAGLNEKLKEKEKQKEKEKEKQKEKEKDDASDGNDVSTSTK
FT                   TGERDRDVNVGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPKQIDISNTRA
FT                   TQSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGEIQVDYP
FT                   IKPLIEHANPSFRQIMAHFSNAAEAYIAKRNATETYMPRYGIKRNLTDISLARYAFDFY
FT                   EVNSKTPDRAREAHMQMKAAALRSTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLL
FT                   GMRN"
XX
SQ   Sequence 1064 BP; 341 A; 185 C; 255 G; 283 T; 0 other;

AF319493  Length: 1064  December 21, 2001 15:30  Type: N  Check: 7753  ..

       1  aatgaagctg tggatgctgg tttgaatgaa aaactcaaag agaaggaaaa
      51  acagaaagaa aaagaaaaag aaaaacaaaa agagaaagaa aaagacgatg
     101  ctagtgacgg aaatgatgtg tcaactagta caaaaactgg agagagagat
     151  agggatgtca atgttgggac cagtggaact ttcactgttc cgagaattaa
     201  atcgtttact gataagatga ttctaccgag aattaaggga aagactgttc
     251  ttaatttaaa tcatcttctt cagtataatc cgaaacaaat tgacatttct
     301  aacactcgtg ccactcagtc acaatttgag aagtggtatg aaggagtgag
     351  gaatgattat ggccttaatg ataatgaaat gcaagtgatg ctaaatggtt
     401  tgatggtttg gtgtatcgag aatggtacat ctccagacat atctggtgtc
     451  tgggttatga tggatgggga aattcaagtt gattacccaa tcaagccttt
     501  aattgagcat gccaatccgt catttaggca aattatggct cactttagta
     551  acgcggcaga agcatacatt gcgaagagaa atgctactga gacctacatg
     601  cctcgttatg gaatcaagag aaatttgact gacattagcc ttgccagata
     651  cgctttcgac ttctatgagg tgaattcgaa aacacctgat agggctcgcg
     701  aagcccacat gcagatgaag gctgcagcgc tgcgaagcac tagtcgcaga
     751  atgtttggta tggatggcag tgttagtaac aaggaagaaa acacggagag
     801  acacacagtg gaagatgtca atagagacat gcactctctc ctgggtatgc
     851  gcaactgaat actcgcgctt gtgtgtttgt cgatcttaat tcgaccctgt
     901  ttcaccttat agtactatat aagcgttaga atatagtgtg gctacgccac
     951  cgcttctatc ttacaatgag ggtatccctc tgtgctttta gtattattcg
    1001  agttctctga gtctccatac agtgtgggtg gcccatgtgc tattcgagcc
    1051  tcttagaatg agag