Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate VrAl-18 coat protein (CP) gene, partial cds.

ACC No: AF319496

Dated: 2001-02-12 | Length: 1064 | CRC: 94991594

                !!NA_SEQUENCE 1.0
ID   AF319496   standard; RNA; VRL; 1064 BP.
XX
AC   AF319496;
XX
SV   AF319496.1
XX
DT   12-FEB-2001 (Rel. 66, Created)
DT   12-FEB-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate VrAl-18 coat protein (CP) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1064
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   "Molecular study of Mexican isolates of papaya ringspot potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1064
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   ;
RL   Submitted (02-NOV-2000) to the EMBL/GenBank/DDBJ databases.
RL   Ingenieria Genetica, Cinvestav IPN, Km 9.6 Libramiento Norte Carr.
RL   Irapuato-Leon, Irapuato, Gto Apdo. 629 CP 36500, Mexico
XX
DR   SPTREMBL; Q99C80; Q99C80.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1064
FT                   /country="Mexico: Veracruz"
FT                   /db_xref="taxon:12205"
FT                   /virion
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="VrAl-18"
FT   CDS             <1. .858
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q99C80"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAK06732.1"
FT                   /translation="NEAVDAGLNEKLKEKEKQKEKEKEKPKEKEKDNARDGNDVSTSTR
FT                   TGEKDRDVNVGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRA
FT                   TQSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGEIQVDYP
FT                   LKPLIEHAHPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFY
FT                   EVNSKTPDRAREAHMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLL
FT                   GMRN"
XX
SQ   Sequence 1064 BP; 343 A; 190 C; 256 G; 275 T; 0 other;

AF319496  Length: 1064  December 21, 2001 15:31  Type: N  Check: 5818  ..

       1  aatgaagctg tggatgctgg tttgaatgaa aaactcaaag aaaaagaaaa
      51  gcagaaagaa aaagaaaaag aaaaaccaaa ggaaaaagaa aaagacaatg
     101  ctcgtgacgg aaatgatgtg tcgactagca caagaactgg agagaaagat
     151  agagatgtca atgtcggaac cagtggaact tttactgttc cgagaattaa
     201  atcattcact gataagatga ttctaccgag aattaaggga aagactgtcc
     251  ttaatttaaa tcatcttctt cagtataatc cgcaacaaat tgacatttct
     301  aacactcgtg ccactcaatc acaatttgag aaatggtatg agggagtgag
     351  gaatgattat ggtctgaatg ataatgaaat gcaagtgatg ctgaatggct
     401  tgatggtttg gtgtatcgag aatggtacat ctccagacat atctggtgtt
     451  tgggttatga tggatggaga aattcaagtt gactatccac tcaagccttt
     501  aattgagcat gcccacccgt catttaggca gattatggct cactttagta
     551  acgcggcaga agcatatatt gcaaagagaa atgccactga gaggtacatg
     601  ccgcggtatg gaatcaagag aaatttgact gacattagcc tcgctagata
     651  tgctttcgat ttctatgagg ttaattcgaa aacacctgat agggctcgcg
     701  aagctcacat gcagatgaaa gctgcagcgc tgcgaaacac tagtcgcaga
     751  atgtttggta tggacggcag tgttagtaac aaggaagaaa acacggaaag
     801  acacacagtg gaagatgtca atagagacat gcactctctc ctgggtatgc
     851  gcaactgaat actcgcgctg gtgtgtttgt cgagctcgac tcgaccttgt
     901  ttcaccttat agtactaagt aagcattaga atacagtgtg gctgtgccac
     951  cacttctatt ttacagtgag ggtagccctc cgtgctttta gtattattcg
    1001  agttctctga gtctccatac agtgtgggtg gcccacgtgt tatctgagcc
    1051  tcttagaatg agag