Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate VrGZ-18 coat protein (CP) gene, partial cds.

ACC No: AF319498

Dated: 2001-02-12 | Length: 1064 | CRC: 1521139471

                !!NA_SEQUENCE 1.0
ID   AF319498   standard; RNA; VRL; 1064 BP.
XX
AC   AF319498;
XX
SV   AF319498.1
XX
DT   12-FEB-2001 (Rel. 66, Created)
DT   12-FEB-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate VrGZ-18 coat protein (CP) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1064
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   "Molecular study of Mexican isolates of papaya ringspot potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1064
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   ;
RL   Submitted (02-NOV-2000) to the EMBL/GenBank/DDBJ databases.
RL   Ingenieria Genetica, Cinvestav IPN, Km 9.6 Libramiento Norte Carr.
RL   Irapuato-Leon, Irapuato, Gto Apdo. 629 CP 36500, Mexico
XX
DR   SPTREMBL; Q99C78; Q99C78.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1064
FT                   /country="Mexico: Veracruz"
FT                   /db_xref="taxon:12205"
FT                   /virion
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="VrGZ-18"
FT   CDS             <1. .858
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q99C78"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAK06734.1"
FT                   /translation="NEAVDAGLNEKLKEKEKQKEKEKEKQKEKEKDNASDGNDVSTSTK
FT                   AGEKDRDVNVGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRA
FT                   TQSQFEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGEIQVDYP
FT                   IKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFY
FT                   EVNSKTPDRAREAHMQMKAAALRNTSRRMFGMDGSVSNEEENTERHTVEDVNRDMHSLL
FT                   GMRN"
XX
SQ   Sequence 1064 BP; 343 A; 187 C; 259 G; 275 T; 0 other;

AF319498  Length: 1064  December 21, 2001 15:31  Type: N  Check: 6729  ..

       1  aatgaagctg tggatgctgg tttgaatgaa aaactcaaag aaaaagaaaa
      51  acagaaagaa aaagaaaaag aaaaacaaaa agaaaaagaa aaagacaacg
     101  ctagtgacgg aaatgatgtg tcgactagca caaaagctgg agagaaagat
     151  agagatgtca atgtcgggac cagtggaact ttcactgttc cgagaattaa
     201  atcattcact gataagatga ttttaccgag aattaaggga aagactgtcc
     251  ttaatttaaa tcatcttctt cagtataatc cgcaacaaat tgacatttct
     301  aacactcgtg ccactcagtc acaatttgag aaatggtatg agggagtgag
     351  gaatgattat ggtctgaatg ataatgaaat gcaagtgatg ctgaatggct
     401  tgatggtttg gtgtatcgag aatggtacat ctccagacat atctggtgtc
     451  tgggttatga tggatgggga aattcaagtt gactatccaa tcaagccttt
     501  aattgagcat gctaccccgt catttaggca gattatggct cactttagta
     551  acgcggcaga agcatatatt gcaaagagaa atgccactga gaggtacatg
     601  ccgcggtatg gaatcaagag aaatttgact gacattagcc tcgctagata
     651  cgctttcgat ttctatgagg tgaattcgaa aacacctgat agggctcgcg
     701  aagctcacat gcagatgaaa gctgcagcgc tgcgaaacac tagtcgcaga
     751  atgtttggta tggacggcag tgttagtaac gaggaagaaa acacggagag
     801  acacacagtg gaagatgtca atagagacat gcactctctc ctgggtatgc
     851  gtaactgaat actcgcgctg gtgtgtttgt cgagctcgac tcgaccttgt
     901  ttcaccttat agtactatat aagcattaga atacagtgtg gctgtgccac
     951  cacttctatt ttacagtgag ggtagccctc cgtgctttta gtattattcg
    1001  agttctctga gtctccatac agtgtgggtg gcccacgtgt tatttgagcc
    1051  tcttagaatg agag