Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate YcY-15 coat protein (CP) gene, partial cds.

ACC No: AF319499

Dated: 2001-02-12 | Length: 1064 | CRC: 918527410

                !!NA_SEQUENCE 1.0
ID   AF319499   standard; RNA; VRL; 1064 BP.
XX
AC   AF319499;
XX
SV   AF319499.1
XX
DT   12-FEB-2001 (Rel. 66, Created)
DT   12-FEB-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate YcY-15 coat protein (CP) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1064
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   "Molecular study of Mexican isolates of papaya ringspot potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1064
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   ;
RL   Submitted (02-NOV-2000) to the EMBL/GenBank/DDBJ databases.
RL   Ingenieria Genetica, Cinvestav IPN, Km 9.6 Libramiento Norte Carr.
RL   Irapuato-Leon, Irapuato, Gto Apdo. 629 CP 36500, Mexico
XX
DR   SPTREMBL; Q99C77; Q99C77.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1064
FT                   /country="Mexico: Yucatan"
FT                   /db_xref="taxon:12205"
FT                   /virion
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="YcY-15"
FT   CDS             <1. .858
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q99C77"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAK06735.1"
FT                   /translation="NEAVDAGLNEKLKEKEKQKEKEKEKQKEKEKDDASDGNDVSTSTK
FT                   TGERDRDVNVGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRA
FT                   TQSQFEKWYEGVRNDYGLNDSEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYP
FT                   IKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFY
FT                   EVNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLL
FT                   GMRN"
XX
SQ   Sequence 1064 BP; 341 A; 191 C; 260 G; 272 T; 0 other;

AF319499  Length: 1064  December 21, 2001 15:31  Type: N  Check: 5584  ..

       1  aatgaagctg tggatgctgg tttgaatgaa aagctcaaag aaaaagaaaa
      51  acagaaagaa aaggaaaaag aaaaacaaaa agagaaagaa aaagacgatg
     101  ctagtgacgg aaatgatgtg tcaactagca caaaaactgg agagagagat
     151  agagatgtca atgttgggac cagtggaact ttcactgttc caagaatcaa
     201  atcattcact gacaagatga ttctaccaag aattaaggga aagactgtcc
     251  ttaatttaaa tcatcttctt cagtataatc cgcaacaaat tgatatttct
     301  aatactcgtg ccactcagtc acaatttgag aagtggtatg agggagtgag
     351  gaatgattat ggccttaatg atagtgaaat gcaagtgatg ttaaatggtt
     401  tgatggtttg gtgtatcgag aatggtacat ctccagatat atctggtgtc
     451  tgggttatga tggatgggga aacccaagtc gattatccaa tcaagccttt
     501  aattgagcat gctactccgt catttaggca aattatggct cactttagta
     551  acgcggcaga agcgtacatt gcaaagagaa atgctactga gaggtacatg
     601  ccgcggtatg gaatcaagag aaatttgact gacattagcc tcgctagata
     651  tgctttcgat ttctatgagg tgaattcgaa aacacctgat agggctcgcg
     701  aagcacacat gcagatgaaa gctgcagcgc tgcgaaacac taatcgcaga
     751  atgtttggta tggacggcag tgttagtaac aaggaagaaa acacggagag
     801  acacacagtg gaagatgtca atagagacat gcactctctc ctgggtatgc
     851  gcaactgaat actcgcgctt gtgtgtccgt cgggcctggc tcgaccctgt
     901  ttcaccttat agtactatat aagcattaga atacagtgtg gctgcgccac
     951  cgcttctatt ttacagtgag ggtagccctc cgtgctttta gtattattcg
    1001  agttctctga gtctccatac agtgtgggtg gcccacgtgc tattcgagcc
    1051  tcttagaatg agag