Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate CpPM-40 coat protein (CP) gene, partial cds.

ACC No: AF319501

Dated: 2001-02-12 | Length: 1058 | CRC: 354966901

                !!NA_SEQUENCE 1.0
ID   AF319501   standard; RNA; VRL; 1058 BP.
XX
AC   AF319501;
XX
SV   AF319501.1
XX
DT   12-FEB-2001 (Rel. 66, Created)
DT   12-FEB-2001 (Rel. 66, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate CpPM-40 coat protein (CP) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1058
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   "Molecular study of Mexican isolates of papaya ringspot potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1058
RA   Noa-Carrazana J.C., Silva-Rosales L.;
RT   ;
RL   Submitted (02-NOV-2000) to the EMBL/GenBank/DDBJ databases.
RL   Ingenieria Genetica, Cinvestav IPN, Km 9.6 Libramiento Norte Carr.
RL   Irapuato-Leon, Irapuato, Gto Apdo. 629 CP 36500, Mexico
XX
DR   SPTREMBL; Q99C75; Q99C75.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1058
FT                   /country="Mexico: Chiapa"
FT                   /db_xref="taxon:12205"
FT                   /virion
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="CpPM-40"
FT   CDS             <1. .852
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q99C75"
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAK06737.1"
FT                   /translation="NEAVDAGLNEKLKEKEKQKEKEKQREKERGDASDGNDVSTSTKTG
FT                   ERDRDVNVGTNGTFTVPKIKSFTDKMILPKIKGETVLNLNHLLQYNPRQIDISNTRATQ
FT                   SQFEKWYEGVRSDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVDYPIK
FT                   PLVEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEV
FT                   NSKTPDRAREAHMQMKAAALRNSNRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGM
FT                   RN"
XX
SQ   Sequence 1058 BP; 332 A; 188 C; 260 G; 278 T; 0 other;

AF319501  Length: 1058  December 21, 2001 15:31  Type: N  Check: 1552  ..

       1  aatgaagctg tggatgctgg tttgaatgag aagctcaaag agaaagaaaa
      51  acagaaagaa aaagaaaaac aaagagagaa agaaagaggc gatgctagtg
     101  acggaaacga tgtgtcgact agcacaaaaa ctggagagag ggatagagat
     151  gtcaacgttg ggaccaatgg aactttcact gttccaaaaa ttaaatcatt
     201  tactgataag atgattctac caaaaattaa gggggagact gtccttaatt
     251  taaatcatct tctccagtat aatccgcgac aaatcgacat ctctaacact
     301  cgtgccactc agtcacaatt tgagaagtgg tatgagggag tgaggagtga
     351  ttatggcctt aatgataatg aaatgcaagt gatgctaaat ggtttgatgg
     401  tttggtgtat cgagaatggt acatctccag acatatctgg tgtctgggtt
     451  atgatggatg gggaaactca agttgattat cccatcaagc ctttagttga
     501  gcatgctact ccgtcattta ggcaaattat ggctcacttt agtaacgcgg
     551  cagaagcata cattgcgaag agaaatgcta ctgagaggta catgccgcga
     601  tatggaatca aaagaaattt gactgacatt agccttgcta gatacgcttt
     651  cgatttttat gaggtgaatt caaaaacacc tgatagagct cgcgaagctc
     701  acatgcagat gaaagctgca gcgctgcgaa attctaatcg cagaatgttt
     751  ggtatggatg gcagtgttag taacaaggaa gaaaacacgg agagacacac
     801  agtggaagat gtcaatagag acatgcactc tctcctgggt atgcgcaact
     851  gaatactcgc gcttgtgtgt ttgttgagcc tggctcaacc ctgtttcacc
     901  ttatagtact atataagcat tagaatacag tgtggctgcg ccaccgcttc
     951  tattttacag tgagggtagc cctccgtgct tttagtatta ttcgagttct
    1001  ttgagtctcc atacagtgtg ggtggcccac gtgttattcg agcctcttag
    1051  aatgagag