Sequence of DPV Barley yellow dwarf virus-GAV
Barley yellow dwarf virus - MAV CN-MAV readthrough protein, coat protein, and movement protein genes, complete cds.
ACC No: AF338909
Dated: 2006-02-27 | Length: 1974 | CRC: -443397910
ID AF338909 standard; genomic RNA; VRL; 1974 BP.
XX
AC AF338909;
XX
SV AF338909.1
XX
DT 19-FEB-2001 (Rel. 66, Created)
DT 27-FEB-2006 (Rel. 86, Last updated, Version 3)
XX
DE Barley yellow dwarf virus - MAV CN-MAV readthrough protein, coat protein,
DE and movement protein genes, complete cds.
XX
KW .
XX
OS Barley yellow dwarf virus - MAV
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC Luteovirus.
XX
RN [1]
RP 1-1974
RA Chang S., Wang X., Ma Z., Li L., Zhou G.;
RT "Cloning and Sequencing of Coat Protein Gene from Barley Yellow Dwarf Virus
RT GAV Virus";
RL Ping Tu Hsueh Pao 15:368-371(1999).
XX
RN [2]
RP 1-1974
RA Chang S., Wang X., Li L., Ma Z., Zhou G.;
RT "The Cloning and Sequencing of Readthrough Protein Gene from BYDV GAV Virus
RT and Its Expression in E. coli";
RL Zhongguo Nong Ye Ke Xue 33:38-45(2000).
XX
RN [3]
RP 1-1974
RA Wang X., Zhou G., Chang S.;
RT ;
RL Submitted (20-JAN-2001) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, Institute of Plant Protection, Chinese Academy of
RL Agriculture Sciences, 2 Yuanmingyuan Xilu, Beijing 100094, China
XX
FH Key Location/Qualifiers
FH
FT source 1. .1974
FT /db_xref="taxon:12038"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Barley yellow dwarf virus - MAV"
FT /isolate="CN-MAV"
FT CDS 1. .1974
FT /codon_start=1
FT /db_xref="GOA:Q99AS9"
FT /db_xref="InterPro:IPR000893"
FT /db_xref="InterPro:IPR001517"
FT /db_xref="InterPro:IPR002929"
FT /db_xref="UniProtKB/TrEMBL:Q99AS9"
FT /note="50kD readthrough protein; translated from subgenomic
FT RNA1 as a fusion protein via read-through of the coat
FT protein stop codon"
FT /transl_except=(pos:598. .600,aa:OTHER)
FT /product="readthrough protein"
FT /protein_id="AAK09438.1"
FT /translation="MNSVGRRNNRRRNGPRRARRAGAVRRMVVVQPNRAGPKRRTRRRT
FT RGGGANLISGPAGRHEVFVFSVNDLKANSSGTIKFGPDLSQCPALSGGILKSYHRYKIT
FT NVKVEFKSHASASTVGAMFIELDTSCSQSTLGSYINSFTLSKSATKNFTAQQIDGKEFR
FT ESSVNQFYMLYKANGSTSDTAGQFIITIRVANMTPKXVDSSTPEPTPQPQPEPKPDPQP
FT TPEPQHKRFFEYVGTPYVIIQTRESSDSIAVKSMNDQSFRYIENETSEQRTVQAWWTSN
FT NGVQAQAAFVFPIPAGEYSVNISCEGLQSVDHIGGNRDGYWIGLIAYQNQSGDYWGVGN
FT YAGCDITNLLGTNTWRPGHEDLELNGCKFTNGQIVERDAVISFHLKAQGADPKFYLMAP
FT KTMKSDKYNYVVSYGGYTDKRMQFGTISVTVDESDVEAQRYNRHTSAVRKTENLDYGWM
FT SVLPPYDPNQVPEQEEEQPMVDKGMDSRSPVEPPSPTSDTEAERAFDLREEKLTRARLE
FT YEAATESIPDAAPDILPSKSEMSSRPIDHDGRSLPKPQSKEVLGTYQGQNITPDDVPPV
FT IAEKLREVNRAPSTLLYDRQPKTPKSFLSRFVETNKTSLASPGSQSSTSGMTREQASEY
FT TRIRKSMGLTAAKEYKASLADT"
FT CDS 1. .600
FT /codon_start=1
FT /db_xref="GOA:Q99AT0"
FT /db_xref="InterPro:IPR001517"
FT /db_xref="UniProtKB/TrEMBL:Q99AT0"
FT /note="22kD coat protein"
FT /product="coat protein"
FT /protein_id="AAK09436.1"
FT /translation="MNSVGRRNNRRRNGPRRARRAGAVRRMVVVQPNRAGPKRRTRRRT
FT RGGGANLISGPAGRHEVFVFSVNDLKANSSGTIKFGPDLSQCPALSGGILKSYHRYKIT
FT NVKVEFKSHASASTVGAMFIELDTSCSQSTLGSYINSFTLSKSATKNFTAQQIDGKEFR
FT ESSVNQFYMLYKANGSTSDTAGQFIITIRVANMTPK"
FT CDS 38. .502
FT /codon_start=1
FT /db_xref="InterPro:IPR001964"
FT /db_xref="UniProtKB/TrEMBL:Q99AS8"
FT /note="17 kD movement protein"
FT /product="movement protein"
FT /protein_id="AAK09437.1"
FT /translation="MAQGEQGALAQFGEWLWSNPIEPDQNEELVDAQEEEGQILYLDQQ
FT AGMRYSYSQSTTLRPTPQGQSSSVPTFRNAQRFQVEYSSPTTVTRSQTSRLSLSHTRPP
FT LQSAQCLLNSTLRAHNQPWVATLTHSPSQNQQPKTSPPNRLTGRNSGRAR"
XX
SQ Sequence 1974 BP; 616 A; 494 C; 445 G; 419 T; 0 other;
af338909 Length: 1974 27-FEB-2006 Type: N Check: 1688 ..
1 atgaattcag taggccgtag aaataaccgc aggagaaatg gcccaaggag
51 agcaaggcgc gctggcgcag ttcggagaat ggttgtggtc caacccaatc
101 gagccggacc aaaacgaaga actcgtcgac gcacaagagg aggaggggca
151 aatcttatat ctggaccagc aggcaggcat gaggtattcg tattctcagt
201 caacgacctt aaggccaact cctcagggac aatcaagttc ggtcccgacc
251 tttcgcaatg cccagcgctt tcaggtggaa tactcaagtc ctaccaccgt
301 tacaagatca caaacgtcaa ggttgagttt aagtcacacg cgtccgcctc
351 tacagtcggc gcaatgttta ttgaactcga cacttcgtgc tcacaatcaa
401 ccttgggtag ctacattaac tcattcaccc tctcaaaatc agcaaccaaa
451 aacttcaccg cccaacagat tgacgggaag gaattcaggg agagctcggt
501 gaatcaattt tatatgctat acaaggcaaa tggtagtaca tctgataccg
551 ccgggcaatt catcattaca atacgcgttg ccaacatgac tcccaaatag
601 gtagactcct caacaccaga gcctacaccc caaccccaac cagagcccaa
651 acctgatccg cagccaacac cagagcctca acacaaacgg tttttcgagt
701 acgtaggaac gccctatgtt atcatacaaa ctagggagag ttcggatagc
751 attgccgtca agtcgatgaa tgatcaatcc tttcggtaca tcgaaaacga
801 aacttctgag caaagaaccg ttcaggcatg gtggacctcc aacaacggcg
851 tccaagcgca agcagcattt gtatttccta tacccgctgg agagtatagt
901 gttaatattt cttgtgaagg tctacaatca gtggaccaca ttggaggaaa
951 ccgagacgga tattggatag gcttaatagc ctaccaaaat caaagcgggg
1001 attattgggg cgtgggcaac tatgctggct gtgatataac caatcttcta
1051 ggaacaaaca cttggcgtcc aggccatgaa gatttggaat tgaacggctg
1101 caaattcact aatggacaga tagttgaaag agacgctgtg atatccttcc
1151 atcttaaagc tcagggtgct gaccccaagt tttacctcat ggcacccaag
1201 accatgaagt ctgacaagta caactatgtc gtgtcttatg gaggctacac
1251 agacaaaaga atgcaatttg gaaccatatc tgtcactgtg gatgaatctg
1301 atgttgaggc acagcgctac aacaggcaca ctagtgcggt taggaaaaca
1351 gaaaacctag attatgggtg gatgagtgtt ctaccaccct atgatcctaa
1401 ccaagtgccg gagcaagagg aagaacaacc aatggtcgac aaggggatgg
1451 attcaagatc tcctgtcgaa cccccttccc caacgtccga cactgaggct
1501 gaaagagcct ttgacttgag agaggaaaaa cttacgaggg ccagacttga
1551 atacgaggca gccactgaat ccatacctga tgctgccccg gacattttac
1601 cctcaaaatc tgaaatgagc agtagaccaa tagaccatga tggaaggtct
1651 ttaccaaaac ctcagtcaaa agaagtcctc ggcacttacc aaggccagaa
1701 catcacacca gatgatgttc ctcctgtcat agctgaaaaa ttgcgtgaag
1751 tgaacagagc accatctact ctgctttacg acaggcagcc aaaaacacca
1801 aaaagctttc tttcccgttt cgtagaaacc aataaaacta gcttggcttc
1851 ccctggttca cagtcttcca catcaggaat gacaagagaa caagcctcag
1901 aatacaccag gattaggaag tcaatgggcc tcacggcagc taaggagtac
1951 aaagccagtt tagctgacac atag