Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate SP biotype P coat protein (cp) gene, partial cds.

ACC No: AF344642

Dated: 2001-04-03 | Length: 924 | CRC: -278096820

                !!NA_SEQUENCE 1.0
ID   AF344642   standard; RNA; VRL; 924 BP.
XX
AC   AF344642;
XX
SV   AF344642.1
XX
DT   03-APR-2001 (Rel. 67, Created)
DT   03-APR-2001 (Rel. 67, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate SP biotype P coat protein (cp) gene, partial
DE   cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-924
RA   Lima R.C.A., Souza Junior M.T., Pio-Ribeiro G., Lima J.A.A.;
RT   "Sequences of the coat protein gene from 13 Brazilian isolates of Papaya
RT   ringspot virus, and the assessment of the gene variability in Brazil and
RT   around the world";
RL   Unpublished.
XX
RN   [2]
RP   1-924
RA   Lima R.C.A., Souza Junior M.T., Pio-Ribeiro G., Lima J.A.A.;
RT   ;
RL   Submitted (02-FEB-2001) to the EMBL/GenBank/DDBJ databases.
RL   PBI - Cenargen, Embrapa, Parque Estacao Biologica, Final Av. W5 Norte,
RL   Brasilia, DF 70770-900, Brazil
XX
DR   SPTREMBL; Q990H0; Q990H0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /country="Brazil: Piracicaba, Sao Paulo"
FT                   /db_xref="taxon:12205"
FT                   /note="biotype: P"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="SP"
FT                   /specific_host="Carica papaya L."
FT   CDS             <1. .924
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q990H0"
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="AAK29035.1"
FT                   /translation="SRSIDDYQPDCGSNTHVFHQSKNEAVDAGLNEKRKEKEKQKEKEE
FT                   EKQKEKEKDNASDGNDVSTSTKTGERDRDVNVGTSGTFTVPRTKSFTDKMILPRIKGKT
FT                   VLNLNHLLQYNPQQIDIFNTRATQSQFEKWYEGVRNDYGLNDNEMQIMLNGLMVWCIEN
FT                   GTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYM
FT                   PRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVS
FT                   NKEENTERHTVEDVNRDMHSLLGMRN"
XX
SQ   Sequence 924 BP; 326 A; 158 C; 219 G; 221 T; 0 other;

AF344642  Length: 924  December 21, 2001 15:32  Type: N  Check: 4227  ..

       1  tcaaggagca ttgatgatta tcaacctgat tgtggcagca atacacatgt
      51  atttcaccag tccaaaaatg aagctgtgga tgctggttta aatgaaaagc
     101  gtaaagaaaa agagaaacaa aaagaaaaag aagaagaaaa acaaaaagag
     151  aaagaaaaag acaatgctag tgacggaaac gatgtgtcaa ctagcacaaa
     201  aactggagag agagacagag atgtcaatgt tgggaccagt ggaactttca
     251  ctgttccgag aacaaaatca tttactgata agatgatttt acctagaatt
     301  aagggaaaga ctgtccttaa tttaaatcat ctccttcagt ataatccgca
     351  acaaattgac atttttaaca ctcgtgccac tcaatcacaa tttgagaagt
     401  ggtatgaggg agtgaggaat gattatggcc ttaatgataa tgaaatgcaa
     451  ataatgctaa atggcttgat ggtttggtgt atcgaaaacg gtacatcccc
     501  agacatatct ggtgtctggg ttatgatgga tggggaaacc caggttgatt
     551  atccaatcaa gcctttaatt gagcatgcta ctccgtcgtt taggcaaatt
     601  atggctcatt tcagtaacgc ggcagaagcg tacattgcaa agagaaatgc
     651  tactgaaagg tacatgccgc ggtatgggat caagagaaat ttgactgaca
     701  ttagtctcgc tagatatgct ttcgatttct atgaggtgaa ttcgaaaaca
     751  cctgataggg ctcgcgaagc tcacatgcag atgaaagctg cagcgctgcg
     801  aaacactaat cgcagaatgt ttggtatgga cggcagtgtc agtaacaagg
     851  aagaaaacac ggagaggcac acagtggaag atgtcaatag agacatgcac
     901  tctctcctgg gtatgcgcaa ctga