Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate PB biotype P coat protein (cp) gene, partial cds.

ACC No: AF344645

Dated: 2001-04-03 | Length: 924 | CRC: -914406385

                !!NA_SEQUENCE 1.0
ID   AF344645   standard; RNA; VRL; 924 BP.
XX
AC   AF344645;
XX
SV   AF344645.1
XX
DT   03-APR-2001 (Rel. 67, Created)
DT   03-APR-2001 (Rel. 67, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate PB biotype P coat protein (cp) gene, partial
DE   cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-924
RA   Lima R.C.A., Souza Junior M.T., Pio-Ribeiro G., Lima J.A.A.;
RT   "Sequences of the coat protein gene from 13 Brazilian isolates of Papaya
RT   ringspot virus, and the assessment of the gene variability in Brazil and
RT   around the world";
RL   Unpublished.
XX
RN   [2]
RP   1-924
RA   Lima R.C.A., Souza Junior M.T., Pio-Ribeiro G., Lima J.A.A.;
RT   ;
RL   Submitted (02-FEB-2001) to the EMBL/GenBank/DDBJ databases.
RL   PBI - Cenargen, Embrapa, Parque Estacao Biologica, Final Av. W5 Norte,
RL   Brasilia, DF 70770-900, Brazil
XX
DR   SPTREMBL; Q990G7; Q990G7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /country="Brazil: Alhandra, Paraiba"
FT                   /db_xref="taxon:12205"
FT                   /note="biotype: P"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="PB"
FT                   /specific_host="Carica papaya L."
FT   CDS             <1. .924
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q990G7"
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="AAK29038.1"
FT                   /translation="SRSTDDHQFVCRSNTHVFHQSKNEAVDAGLSEKLKEKEKQKEKER
FT                   EKQKEKEKDDASDGNDVSTSTKTGERGRDVNVGTSGTFTVPRTKSFTDKMTLPRIKGKT
FT                   VLNLNHLLQYNPQQIDIYNTRATQSQFEKWYEGVRNDYGLNDNEMQIMLNGLMVWCIEN
FT                   GTSPDISGVWVMMDGETQVDYPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYM
FT                   PRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVS
FT                   NKEENTERHTVEDVNRDMHSLLGMRN"
XX
SQ   Sequence 924 BP; 327 A; 155 C; 218 G; 224 T; 0 other;

AF344645  Length: 924  December 21, 2001 15:32  Type: N  Check: 7483  ..

       1  tcaaggagca ctgatgatca tcaatttgtc tgtagaagca atacacatgt
      51  gtttcatcag tccaaaaatg aagctgtgga tgctggtttg agtgaaaagc
     101  tcaaagaaaa agagaaacaa aaagaaaaag aaagagaaaa acaaaaagag
     151  aaagaaaaag acgatgctag tgatggaaat gatgtgtcaa ctagcacaaa
     201  aactggagag agaggcagag atgtcaatgt tgggaccagt ggaactttca
     251  ctgttccgag aacaaaatca tttactgata agatgacttt acctagaatt
     301  aagggaaaga ctgtccttaa tttaaatcat ctccttcagt ataatccaca
     351  acaaattgac atttataata ctcgtgccac tcaatcacaa tttgagaagt
     401  ggtatgaggg agtgaggaat gattatggcc ttaatgataa tgaaatgcaa
     451  ataatgctaa atggcttgat ggtttggtgt atcgagaatg gtacatctcc
     501  agacatatct ggtgtctggg ttatgatgga tggggaaact caagttgatt
     551  atccaatcaa acctttaatt gagcacgcta ctccgtcgtt taggcaaatt
     601  atggctcact tcagtaacgc ggcagaagca tacattgcaa agagaaatgc
     651  caccgagagg tacatgccgc ggtatggaat caagagaaat ttgactgaca
     701  ttagcctcgc tagatatgct ttcgatttct atgaggtgaa ttcgaaaaca
     751  cctgataggg ctcgtgaagc tcatatgcag atgaaagctg cagcgctgcg
     801  aaacactaat cgcagaatgt ttggtatgga cggcagtgtt agtaacaagg
     851  aagaaaacac ggagagacac acagtggaag atgtcaatag agacatgcac
     901  tctctcctgg gtatgcgcaa ctga