Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate CE biotype W coat protein (cp) gene, partial cds.

ACC No: AF344648

Dated: 2001-04-03 | Length: 924 | CRC: 1568501482

                !!NA_SEQUENCE 1.0
ID   AF344648   standard; RNA; VRL; 924 BP.
XX
AC   AF344648;
XX
SV   AF344648.1
XX
DT   03-APR-2001 (Rel. 67, Created)
DT   03-APR-2001 (Rel. 67, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate CE biotype W coat protein (cp) gene, partial
DE   cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-924
RA   Lima R.C.A., Souza Junior M.T., Pio-Ribeiro G., Lima J.A.A.;
RT   "Sequences of the coat protein gene from 13 Brazilian isolates of Papaya
RT   ringspot virus, and the assessment of the gene variability in Brazil and
RT   around the world";
RL   Unpublished.
XX
RN   [2]
RP   1-924
RA   Lima R.C.A., Souza Junior M.T., Pio-Ribeiro G., Lima J.A.A.;
RT   ;
RL   Submitted (02-FEB-2001) to the EMBL/GenBank/DDBJ databases.
RL   PBI - Cenargen, Embrapa, Parque Estacao Biologica, Final Av. W5 Norte,
RL   Brasilia, DF 70770-900, Brazil
XX
DR   SPTREMBL; Q990G4; Q990G4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /country="Brazil: Aracoiaba, Ceara"
FT                   /db_xref="taxon:12205"
FT                   /note="biotype: W"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="CE"
FT                   /specific_host="Carica papaya L."
FT   CDS             <1. .924
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q990G4"
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="AAK29041.1"
FT                   /translation="SRSTDDCQLVCSSNTHVFHQSKNEAVDAGLNEKLKENEKQKEKEK
FT                   EKQKEKEKDDASDGNDVSTSTKTGERDRDVNVGTSGTFTVPKIKSFTDKMILPRIKGKT
FT                   VLNLNHLLQYNPQQIDISNTRATQSQFEKWYEGVRNDYGLNDNEMQIMLNGLMVWCIEN
FT                   GTSPDISGVWVMMDGEIQVDYPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYM
FT                   PRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVS
FT                   NKEENTERHTVEDVNRDMHSLLGMRN"
XX
SQ   Sequence 924 BP; 328 A; 158 C; 217 G; 221 T; 0 other;

AF344648  Length: 924  December 21, 2001 15:32  Type: N  Check: 5804  ..

       1  tcaaggagca ctgatgattg tcaacttgtt tgtagtagca atacacatgt
      51  gttccatcag tccaaaaatg aagctgtgga tgctggtttg aatgaaaagc
     101  tcaaagaaaa cgagaaacaa aaagaaaaag aaaaagaaaa acaaaaagag
     151  aaagaaaaag acgatgctag tgacggaaat gatgtgtcga ctagcacaaa
     201  aactggagag agagacagag atgtcaatgt tgggaccagt ggaactttca
     251  ctgttccgaa aataaaatca tttactgata agatgatttt acctagaatt
     301  aagggaaaga ctgtccttaa tttaaatcat ctccttcagt ataatccaca
     351  acaaattgac atttctaaca ctcgtgccac tcaatcacaa tttgagaagt
     401  ggtatgaggg agtgaggaat gattatggcc ttaatgataa tgaaatgcaa
     451  ataatgctaa acggcttgat ggtttggtgt atcgagaatg gtacatcccc
     501  agacatatct ggtgtctggg ttatgatgga tggggaaatc caagttgatt
     551  atccaatcaa gcctttaatt gagcatgcaa ccccgtcgtt taggcaaatt
     601  atggctcact tcagtaacgc ggcagaagca tacattgcaa agagaaatgc
     651  cactgagagg tacatgccgc gatatggaat aaagagaaat ttgactgaca
     701  ttagcctcgc tagatatgct ttcgatttct atgaggtgaa ttcgaaaaca
     751  cctgataggg ctcgtgaagc tcatatgcag atgaaagctg cagcgctgcg
     801  aaacacgaat cgcagaatgt ttggtatgga cggcagtgtc agtaacaagg
     851  aagaaaacac ggagagacac acagtggaag atgtcaatag agacatgcac
     901  tctctcctgg gtatgcgcaa ctga