Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate DF biotype W coat protein (cp) gene, partial cds.

ACC No: AF344649

Dated: 2001-04-03 | Length: 924 | CRC: -389332079

                !!NA_SEQUENCE 1.0
ID   AF344649   standard; RNA; VRL; 924 BP.
XX
AC   AF344649;
XX
SV   AF344649.1
XX
DT   03-APR-2001 (Rel. 67, Created)
DT   03-APR-2001 (Rel. 67, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate DF biotype W coat protein (cp) gene, partial
DE   cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-924
RA   Lima R.C.A., Souza Junior M.T., Pio-Ribeiro G., Lima J.A.A.;
RT   "Sequences of the coat protein gene from 13 Brazilian isolates of Papaya
RT   ringspot virus, and the assessment of the gene variability in Brazil and
RT   around the world";
RL   Unpublished.
XX
RN   [2]
RP   1-924
RA   Lima R.C.A., Souza Junior M.T., Pio-Ribeiro G., Lima J.A.A.;
RT   ;
RL   Submitted (02-FEB-2001) to the EMBL/GenBank/DDBJ databases.
RL   PBI - Cenargen, Embrapa, Parque Estacao Biologica, Final Av. W5 Norte,
RL   Brasilia, DF 70770-900, Brazil
XX
DR   SPTREMBL; Q990G3; Q990G3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .924
FT                   /country="Brazil: Brasilia, Distrito Federal"
FT                   /db_xref="taxon:12205"
FT                   /note="biotype: W"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="DF"
FT                   /specific_host="Carica papaya L."
FT   CDS             <1. .924
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q990G3"
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="AAK29042.1"
FT                   /translation="SRSTDDYQLVCSSNTHVFHQSKNEAVDAGSNEKLKEKEKQKEKER
FT                   EKQKEKEKDDASDGNDVSTSTKTGERDRDVNVGTSGTFTVPRTKPFTGKMILPRIKGKT
FT                   VLNLNHLLQYNPQQIDISNTRATQSQFEKWYEGVRNDYGLNDNEMQIMLNGLMVWCIEN
FT                   GTSPDISGVWVMMDGEAQVDYPIKPLIEHATPSFRQIMAHFSNAAEAYIAKRNATERYM
FT                   PRYGIKRNLTDISLARYAFDFYEVNSKTPDRAREAHMQMKAAALRNTNRRMFGMDGSVS
FT                   NKEENTERHTEEDVNRDMHSLLGRRN"
XX
SQ   Sequence 924 BP; 325 A; 169 C; 220 G; 210 T; 0 other;

AF344649  Length: 924  December 21, 2001 15:32  Type: N  Check: 1016  ..

       1  tcaaggagca ctgatgatta ccaacttgtt tgtagcagca atacacatgt
      51  gtttcatcag tctaaaaatg aagctgtgga tgctggttcg aacgaaaagc
     101  tcaaagaaaa agagaaacaa aaagaaaaag aaagagaaaa acaaaaagag
     151  aaagaaaaag acgatgctag tgacggaaat gatgtgtcaa ctagcacaaa
     201  aactggagag agagacagag atgtcaatgt tgggaccagt ggaactttca
     251  ctgttccgag aacaaaacca tttactggta agatgatttt acctagaatt
     301  aagggaaaga ctgtccttaa tttaaatcat ctccttcagt ataacccaca
     351  acaaattgac atttctaaca ctcgtgccac tcaatcacaa tttgagaagt
     401  ggtatgaggg agtgaggaat gattatggcc ttaatgacaa tgaaatgcaa
     451  ataatgctaa atggcttgat ggtttggtgt atcgagaacg gtacatcccc
     501  agacatatct ggtgtctggg ttatgatgga tggggaagcc caagttgatt
     551  atccaatcaa gcctttaatt gagcatgcca ctccgtcgtt taggcaaatc
     601  atggctcact tcagtaacgc ggcagaagca tacattgcaa agagaaatgc
     651  caccgagagg tacatgccgc ggtatggaat caagagaaat ttgactgaca
     701  ttagcctcgc tagatatgct ttcgatttct atgaggtgaa ttcgaaaaca
     751  cctgataggg ctcgcgaagc tcatatgcag atgaaagctg cagcgctgcg
     801  aaacactaat cgcagaatgt tcggcatgga cggcagtgtt agtaacaagg
     851  aagaaaacac ggagagacac acagaggaag atgtcaatag agacatgcac
     901  tctctcctgg gtaggcgcaa ctga