Sequence of DPV Plum pox virus

Plum pox virus strain D isolate PEN Plm polyprotein gene, partial cds.

ACC No: AF354269

Dated: 2002-12-31 | Length: 1334 | CRC: -1058654254

                !!NA_SEQUENCE 1.0
ID   AF354269   standard; RNA; VRL; 1334 BP.
XX
AC   AF354269;
XX
SV   AF354269.1
XX
DT   31-DEC-2002 (Rel. 74, Created)
DT   31-DEC-2002 (Rel. 74, Last updated, Version 1)
XX
DE   Plum pox virus strain D isolate PEN Plm polyprotein gene, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1334
RA   Levy L., Mavrodieva V.A., Goley E.D., Luster D.G.;
RT   "Partial characterization of the PPV isolates from Adams County,
RT   Pennsylvania";
RL   Unpublished.
XX
RN   [2]
RP   1-1334
RA   Levy L., Mavrodieva V.A., Goley E.D., Luster D.G.;
RT   ;
RL   Submitted (26-FEB-2001) to the EMBL/GenBank/DDBJ databases.
RL   USDA-APHIS-NPGQC, Bldg. 580, BARC-East, Beltsville, MD 20705, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1334
FT                   /country="USA"
FT                   /db_xref="taxon:12211"
FT                   /organism="Plum pox virus"
FT                   /strain="D"
FT                   /isolate="PEN Plm"
FT                   /specific_host="Prunus domestica"
FT   CDS             <1. .1117
FT                   /codon_start=2
FT                   /note="contains NIb and CP"
FT                   /product="polyprotein"
FT                   /protein_id="AAO13300.1"
FT                   /translation="ETALKKLYTDTEASETEIERYLEAFYDDINDDGESNVVVHQADER
FT                   EDEEEVDAGKPIVVTAPAATSPILQPPPVIQPAPRTTAPMLNPIFTPATTQPATRPVSQ
FT                   VSGPQLQTFGTYGNEDASPSNSNALVNTNRDRDVDAGSIGTFTVPRLKAMTSKLSLPKV
FT                   KGKAIMNLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRDYDVTDDEMSIILNGLMVW
FT                   CIENGTSPNINGMWVMMDGETQVEYPIKPLLDHAKPTFRQIMAHFSNVAEAYIEKRNYE
FT                   KAYMPRYGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHIQMKAAALRNVQNRLFGLD
FT                   GNVGTQEEDTERHTAGDVNRNMHNLLGVRGV"
XX
SQ   Sequence 1334 BP; 403 A; 290 C; 312 G; 329 T; 0 other;

AF354269  Length: 1334  January 14, 2003 14:20  Type: N  Check: 9291  ..

       1  ggagacagca ctgaagaagc tttacactga cactgaagca tctgagacag
      51  aaattgagcg atatcttgaa gctttttacg acgacattaa cgatgatggt
     101  gagtccaacg ttgttgtgca ccaagctgac gaaagagaag acgaggagga
     151  agttgatgca ggcaagccga ttgtagttac tgcaccggca gcaactagcc
     201  caatacttca accacctcca gtcatacagc ctgcaccccg gactacggcg
     251  ccaatgctca accccatttt cacgccagca acaactcaac cagcaacaag
     301  accagtttca caggtgtcag gacctcaact gcaaactttt ggaacatatg
     351  gtaatgagga tgcatcacct agcaactcaa acgcgctggt caacacaaac
     401  agagacaggg acgtcgatgc aggatcaatt ggaactttta cagtgccacg
     451  tttgaaggca atgacttcga aactatctct gccaaaggtg aagggaaagg
     501  ctattatgaa cttgaaccat ttggcacatt atagtcctgc acaggttgac
     551  ttgtcaaaca cgagagctcc gcagtcttgt ttccaaactt ggtatgaagg
     601  agttaagcga gattatgatg tcacggacga tgaaatgagc atcattttaa
     651  acggtcttat ggtttggtgc atagagaatg gaacatcccc gaatatcaat
     701  ggaatgtggg tgatgatgga tggggaaaca caagtggagt atccaataaa
     751  gccattgttg gatcatgcga aacccacttt tagacaaatt atggcacatt
     801  tcagtaacgt ggctgaagcg tatattgaaa aacgaaatta tgaaaaagca
     851  tacatgccaa ggtatggaat tcagcgcaac ctgacagact acagcctcgc
     901  cagatatgcc tttgattttt acgaaatgac ttcaacgaca cccgtacggg
     951  cacgtgaagc tcatatccag atgaaggcag cagcattgag aaatgttcaa
    1001  aatcgtttat ttggcttgga tggaaacgtc ggaacacaag aagaggacac
    1051  agagagacac accgctggtg atgttaatcg caacatgcac aacctcctcg
    1101  gtgtgagggg agtgtagtgg tctcggtatc tatcataaac tctacctggg
    1151  tgagagtcta atcatccagt tgtttttaga ttcctgttag catccttttc
    1201  tccgctttaa tagcagtaca ttcagtgagg ttttacctcc atatgttcta
    1251  gtctgttatt gtcgaacaca ggcccttgta tctgatgtag cgagtgcttc
    1301  actccattcg ggttatagtt cttgtgcaag agac