Sequence of DPV Plum pox virus

Plum pox virus BOR-3 polyprotein gene, partial cds.

ACC No: AF357541

Dated: 2002-03-01 | Length: 836 | CRC: 1962454065

                !!NA_SEQUENCE 1.0
ID   AF357541   standard; genomic RNA; VRL; 836 BP.
XX
AC   AF357541;
XX
SV   AF357541.1
XX
DT   29-MAR-2001 (Rel. 67, Created)
DT   01-MAR-2002 (Rel. 70, Last updated, Version 2)
XX
DE   Plum pox virus BOR-3 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-836
RX   DOI; 10.1007/s007050200006.
RX   PUBMED; 11958455.
RA   Glasa M., Marie-Jeanne V., Moury B., Kudela O., Quiot J.B.;
RT   "Molecular variability of the P3-6K1 genomic region among geographically
RT   and biologically distinct isolates of Plum pox virus";
RL   Arch. Virol. 147(3):563-575(2002).
XX
RN   [2]
RP   1-836
RA   Glasa M., Marie-Jeanne V., Quiot J.B.;
RT   ;
RL   Submitted (08-MAR-2001) to the EMBL/GenBank/DDBJ databases.
RL   Virus-Vecteurs, ENSA-INRA, 2, place Viala, Montpellier 34060, France
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .836
FT                   /db_xref="taxon:12211"
FT                   /mol_type="genomic RNA"
FT                   /organism="Plum pox virus"
FT                   /isolate="BOR-3"
FT   CDS             <1. .>836
FT                   /codon_start=2
FT                   /db_xref="UniProtKB/TrEMBL:Q98XT3"
FT                   /note="encodes partial P3, 6K1, and start of CI protein"
FT                   /product="polyprotein"
FT                   /protein_id="AAK27226.1"
FT                   /translation="YLQELEQAWKELSWSEKFSAILESQRWRKHIPKPFIPKDGADLGG
FT                   RYDISVRSLLGNQYKRLRDVVRRKRDDVVCYTHQSMGKLFCKAIGISTSFLPSTLKMLD
FT                   MLIVFGLLLSIGATCNSMINEHKHLKQLAADREDKKRFKRLQVLYTRLSEKAGCTPTAD
FT                   EFLEYVGGENPDLLKHAEDLIGDGQVVVHQSKRDSQANLERVVAFVALVMMLFDSERSD
FT                   GVYKILNKLKGIMGSVDQAVHHQSLDDIEDILDEKKLTVDFVLQSNEVAPTVPFDS"
XX
SQ   Sequence 836 BP; 253 A; 167 C; 207 G; 209 T; 0 other;

AF357541  Length: 836  December 20, 2005 16:47  Type: N  Check: 2169  ..

       1  ttatctccag gagttggagc aagcttggaa agagttaagc tggtcggaaa
      51  aattctctgc aatcttggaa tcgcagcggt ggcgaaaaca tataccaaaa
     101  cctttcatcc cgaaagacgg cgcagattta ggaggcaggt acgatatctc
     151  cgttcggtca ttacttggca accagtacaa acgcctgaga gacgtagtcc
     201  gccggaaaag agacgacgtg gtttgctata cacaccagtc gatggggaag
     251  ctattttgca aagccatcgg aatttccaca agttttcttc caagcactct
     301  taagatgctt gacatgctca tcgtattcgg tctcttgctt tcaataggag
     351  ccacatgtaa ctcaatgatc aatgagcata aacatcttaa gcaacttgcc
     401  gccgatcggg aagataagaa aaggttcaaa agattgcaag tcttatacac
     451  gagattatcg gagaaggctg gttgcacacc aacagcagat gaattcctgg
     501  agtatgtggg aggtgaaaac cctgatttac tgaaacatgc agaggatcta
     551  attggggatg gtcaagttgt tgttcatcaa agcaagagag attcacaagc
     601  aaatttggaa cgggttgtag catttgtagc tcttgttatg atgctgtttg
     651  actcggagcg aagtgacggc gtgtacaaga ttctcaataa actcaaaggc
     701  atcatgggga gtgttgacca ggctgttcat catcagagct tggacgatat
     751  agaagatata ctggatgaga agaagctcac agtcgatttt gtgctgcaaa
     801  gtaacgaagt cgcaccaact gtcccatttg actcaa