Sequence of DPV Beet mosaic virus

Beet mosaic virus isolate REN-1 polyprotein gene, partial cds.

ACC No: AF363639

Dated: 2003-09-24 | Length: 1640 | CRC: -252991735

                !!NA_SEQUENCE 1.0
ID   AF363639   standard; genomic RNA; VRL; 1640 BP.
XX
AC   AF363639;
XX
SV   AF363639.1
XX
DT   08-MAY-2001 (Rel. 67, Created)
DT   24-SEP-2003 (Rel. 77, Last updated, Version 2)
XX
DE   Beet mosaic virus isolate REN-1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Beet mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1640
RX   PUBMED; 14505096.
RA   Glasa M., Kudela O., Subr Z.;
RT   "Molecular analysis of the 3' terminal region of the genome of Beet mosaic
RT   virus and its relation with other potyviruses";
RL   Arch. Virol. 148(9):1863-1871(2003).
XX
RN   [2]
RP   1-1640
RA   Glasa M., Subr Z., Kudela O.;
RT   "Variability of beet mosaic virus isolates occurring in Slovakia";
RL   Unpublished.
XX
RN   [3]
RP   1-1640
RA   Glasa M., Subr Z., Kudela O.;
RT   ;
RL   Submitted (23-MAR-2001) to the EMBL/GenBank/DDBJ databases.
RL   Institute of Virology, Slovak Academy of Sciences, Dubravska cesta 9,
RL   Bratislava 84245, Slovakia
XX
DR   GOA; Q91S94.
DR   SPTREMBL; Q91S94; Q91S94.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1640
FT                   /country="Slovakia"
FT                   /db_xref="taxon:114921"
FT                   /mol_type="genomic RNA"
FT                   /organism="Beet mosaic virus"
FT                   /isolate="REN-1"
FT                   /specific_host="Beta vulgaris cultivar Renata"
FT   CDS             <1. .1465
FT                   /codon_start=2
FT                   /db_xref="GOA:Q91S94"
FT                   /db_xref="SPTREMBL:Q91S94"
FT                   /note="contains partial NIb protein and complete capsid
FT                   protein"
FT                   /product="polyprotein"
FT                   /protein_id="AAK50816.1"
FT                   /translation="IGNNSGQPSTVVDNTLMVILAMHYAMHQQCWREEEMKEKIRFFAN
FT                   GDDLLIAIHPSKEKFLNVLSEYFHELGLKYDFSSRSTVRETLWFMSHRGLYHDDMYIPK
FT                   LEEERIVSILEWDRSNEATHRAEAICAAMIEAWGYPELLKYIREFYLWMMHHECYRDLV
FT                   RDGKLPYIAETALRKLYTDKSVDESELVKYWKALAPEEEDGPDIVTYQGDEKPSKSSQP
FT                   QSSSPQVPQQVDAGASSQGKDKQSVIKHDSTKSKDVGQSSTAVPRLKQISKMRMPVSKG
FT                   RQVLALDHLLDYKPEQVDLSNTRATREQFDNWYEAVMKEYDVSDSQMGVIMNGLMVWCI
FT                   ENGTSPNLSGDWVMMDGEEQVSFPLKPIIEDAKPSFRQIMHHFSDAAEAYIEMRNRERP
FT                   YMPRYGAQRNLRDRTLARYAFDFYEVTSRTTDRAREAHFQMKAAALASVSNKLFGLDGS
FT                   VATTSEDTERHTATDVNAHMHHMMGVRQG"
XX
SQ   Sequence 1640 BP; 504 A; 326 C; 411 G; 399 T; 0 other;

AF363639  Length: 1640  October 7, 2003 08:45  Type: N  Check: 1847  ..

       1  gattgggaat aacagtggac aaccatcaac agttgttgac aacactttaa
      51  tggttatcct tgcaatgcat tacgcgatgc atcagcagtg ctggagggaa
     101  gaggaaatga aagagaagat tcggttcttc gcaaatggtg atgatctgct
     151  aatagctata catccgagta aggagaaatt cttgaacgtg ctctcagaat
     201  atttccacga gcttgggttg aaatatgatt tctcgagcag aagcaccgtg
     251  cgcgagactt tgtggttcat gtcacacagg gggctttatc atgatgatat
     301  gtatatccct aaacttgaag aggaacgcat cgtttcaatt cttgaatggg
     351  acaggagcaa tgaagccaca catagagctg aagcaatatg tgctgcaatg
     401  attgaggcat ggggataccc agaacttttg aagtacattc gtgagttcta
     451  tctatggatg atgcatcatg aatgttatag ggatctggtg cgtgatggaa
     501  agctaccata tattgcagag acagctctta gaaagctcta cactgacaag
     551  agcgtggatg agagtgagct tgtcaagtac tggaaagcac ttgcaccaga
     601  ggaggaggat ggcccggata tagtcacata ccaaggtgat gagaaaccct
     651  caaagtcttc acagccacag agctcaagtc cacaagtgcc acaacaagtt
     701  gatgctggag ctagctctca aggaaaggac aagcagagtg tcatcaagca
     751  cgatagcaca aagagcaaag atgtgggaca atcgagcact gctgttccaa
     801  gattgaagca gatctcaaaa atgaggatgc ctgttagcaa aggacgtcaa
     851  gttttagcac ttgaccatct attggattat aagccagaac aggttgatct
     901  ctcaaacacc agagctacga gggagcagtt tgacaattgg tatgaagcag
     951  tcatgaagga atacgatgtg tcagattccc aaatgggtgt gattatgaat
    1001  ggactcatgg tgtggtgtat tgagaatggc acatcaccaa atctcagtgg
    1051  agactgggtc atgatggatg gagaagaaca agtctcattc cccttgaagc
    1101  cgataataga agatgctaaa ccatcttttc ggcaaataat gcatcacttt
    1151  tctgatgcag cagaagcgta tattgaaatg cgcaacagag aaaggccata
    1201  catgcctcgt tatggcgctc agagaaatct gagagacagg acgctagctc
    1251  gctatgcatt cgatttctat gaggtcacct cacgaacaac tgatcgtgca
    1301  cgtgaagctc atttccaaat gaaggcggca gcgttggcaa gcgtgtccaa
    1351  caagctcttt gggcttgatg ggagcgtggc caccacatcg gaggatacag
    1401  agaggcacac agccacagat gtcaacgctc acatgcatca catgatgggc
    1451  gttaggcaag gttaattctg tacctcgttc tatgaatagt taaatatggt
    1501  aaccatttaa aagagtgagg ttttacctcc gttgcttatt tctatttcgc
    1551  atagttccaa accactaccc tcaataggcg tctcatagtg aggttttacc
    1601  tcggaggatt ctacggacgg tacacaggtt tacaaaaaaa