Sequence of DPV Lycoris mild mottle virus

Lycoris mild mottle virus polyprotein gene, partial cds.

ACC No: AF399672

Dated: 2003-01-02 | Length: 1989 | CRC: 376711474

                !!NA_SEQUENCE 1.0
ID   AF399672   standard; RNA; VRL; 1989 BP.
XX
AC   AF399672;
XX
SV   AF399672.1
XX
DT   02-JAN-2003 (Rel. 74, Created)
DT   02-JAN-2003 (Rel. 74, Last updated, Version 1)
XX
DE   Lycoris mild mottle virus polyprotein gene, partial cds.
XX
KW   .
XX
OS   Lycoris mild mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1989
RA   Chang C.-A., Chen C.-C.;
RT   "Molecular and serological evidence for golden spider lily severe mosaic
RT   disease infected by two distinct potyviruses";
RL   Unpublished.
XX
RN   [2]
RP   1-1989
RA   Chang C.-A., Chen C.-C.;
RT   ;
RL   Submitted (13-JUL-2001) to the EMBL/GenBank/DDBJ databases.
RL   Plant Pathology, Taiwan Agricultural Research, 189 Chung-cheng Road,
RL   Wu-feng, Taichung 413, Taiwan, R.O.C.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1989
FT                   /db_xref="taxon:186187"
FT                   /virion
FT                   /organism="Lycoris mild mottle virus"
FT   CDS             <1. .1758
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AAO13836.1"
FT                   /translation="GSVVWMIFNNQFYSLHFVLPSSVGMTKFINGWDTLLAQLPDGWIY
FT                   CDADGSQFDSSLSPYLINAVLNLRLHFMENWDIGHQMLQNLITEIVYTPIATPSGTIVK
FT                   KYNGNNSGQPSTVVDNTIMVIFTMYYAINMSGESGEHAEFIKYFINGDDLLIAVRPDKE
FT                   YLLDQFQERLVSWVSSNTFDSRTRAKHDLWFMSHQGIQRDDMVIPKLEKERIVSILEWD
FT                   RANLPEHRLEALCAAMIEAWGYDDLIREIRKFYYWVLHQEPYSELSAQGKAPYISEVAL
FT                   KALYTGERAKESELEKYLQTMQLLNAHYDEEFTFQADVERTVDAGAGQTSSRSSQIETS
FT                   TQRSSLAQKEPDVNVGSIGTFSVPKLKTIASKVRLPMVRGKRVINLDHLLVYTPVQSDL
FT                   YNTRATQAQFDAWYDGVKEAYDLDDDQMQIVMNGLMVWCVENGTSPNLNGTWVMMSGDK
FT                   QIEYPNNLLLDHAQPTLRQIMAHFSELAEAYIIKRNMVKSYVPRYALKRNLTDTSLAQY
FT                   AFDFLEITSRTPARAREAQAQMKAAALKNVRTKMFGLDGSVDIPEEDTERHTTTDVNRN
FT                   MHSLLGERL"
FT   mat_peptide     <1. .948
FT                   /note="NIb"
FT                   /product="nuclear inclusion b protein"
FT   mat_peptide     949. .1755
FT                   /product="coat protein"
FT   3'UTR           1756. .1989
XX
SQ   Sequence 1989 BP; 616 A; 338 C; 483 G; 552 T; 0 other;

AF399672  Length: 1989  January 14, 2003 16:43  Type: N  Check: 5324  ..

       1  ggatccgttg tgtggatgat tttcaacaac caattttaca gtctgcattt
      51  tgtgttgcct tcgagcgttg gaatgacaaa atttattaat ggatgggaca
     101  cacttcttgc gcagttaccg gatggatgga tatattgtga tgctgatgga
     151  tctcagttcg atagttcgtt atcgccgtat cttatcaatg cagtgcttaa
     201  tttgcgtttg cattttatgg aaaactggga tattggacat cagatgttgc
     251  aaaatttaat cactgagata gtctacacac caatagccac acctagcggt
     301  acgattgtga agaagtacaa tggaaataat agtggacagc catcaacagt
     351  tgtagataac acaataatgg taatttttac catgtattat gctataaata
     401  tgagtggcga gagtggcgaa catgctgagt tcataaaata tttcattaat
     451  ggtgatgatc ttttaatagc tgttcgaccg gacaaagagt atcttctgga
     501  ccaatttcag gaaagattag tgagctgggt ctcaagtaac acttttgact
     551  cacgaacacg agcgaaacat gatctatggt ttatgtcgca tcaaggaatt
     601  cagagagatg acatggtgat tccgaaactt gagaaagaga gaattgtttc
     651  cattcttgag tgggatcgtg caaatctccc agagcataga ttggaggcgt
     701  tgtgtgcagc gatgattgag gcatggggtt atgatgacct cattagggag
     751  ataaggaaat tttactattg ggttttgcac caagaaccat atagtgagtt
     801  gtctgcacaa ggaaaagctc cttacatatc tgaagttgct cttaaagctt
     851  tgtacacagg ggaaagagcg aaagaaagtg agctagaaaa gtatctacaa
     901  acaatgcaac tcctaaacgc acattatgat gaggagttta cttttcaagc
     951  agatgttgaa aggaccgttg atgctggtgc tgggcagaca tcatcaagaa
    1001  gctcacaaat agaaacaagc acacagagga gcagtttggc acaaaaagaa
    1051  ccggatgtga acgttgggag tattggaacg ttttcagttc ctaaactcaa
    1101  aacaattgca tcaaaggttc gattaccgat ggttcgagga aaaagggtga
    1151  taaatcttga ccacttgctc gtctacacac cggttcagag tgatctatac
    1201  aatacacgcg caacacaagc acagtttgat gcgtggtatg atggagtgaa
    1251  agaggcatat gatcttgatg atgatcaaat gcaaattgtg atgaatggtt
    1301  tgatggtgtg gtgcgttgaa aacggaacat caccaaattt aaatgggacg
    1351  tgggttatga tgagtggtga taagcaaatt gagtatccga ataacctgtt
    1401  attggatcac gcacaaccca cattgagaca gataatggcg catttttctg
    1451  aactagcaga agcgtacatt attaagagga atatggtgaa gtcatacgtg
    1501  cctcgatacg ccttaaaaag aaatttaacc gacacaagct tggcgcaata
    1551  tgcgtttgat ttcttggaaa tcacgtctag aacaccagct agagcgagag
    1601  aagcacaagc acaaatgaag gcagcagcat tgaagaatgt tcgaacaaaa
    1651  atgtttggct tggatggaag tgtcgatata ccggaggagg acacggaaag
    1701  acacacaacc acagatgtaa acagaaacat gcatagcctg ttgggtgaac
    1751  ggttgtagtg gtcttagttt ggagctctat accagtaaga gctagtaggt
    1801  tactgggaat attatatctc ctttcccgta gtggtatcct ctctctaaag
    1851  tatgttagta cttatttaca tgttggtgta gcgaggtttt tcctcctttg
    1901  tccgtatgat actagcatat cgagctgctc tggtgggaaa ctcttttgtg
    1951  aggttaaacc ttgtgggcgt acttcccttt gcagtaaga