Sequence of DPV Tobacco bushy top virus
Tobacco bushy top virus, complete genome.
ACC No: AF402620
Dated: 2003-02-11 | Length: 4152 | CRC: -514698215
!!NA_SEQUENCE 1.0
ID AF402620 standard; RNA; VRL; 4152 BP.
XX
AC AF402620; AF431890;
XX
SV AF402620.2
XX
DT 22-JAN-2002 (Rel. 70, Created)
DT 11-FEB-2003 (Rel. 74, Last updated, Version 4)
XX
DE Tobacco bushy top virus, complete genome.
XX
KW .
XX
OS Tobacco bushy top virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Umbravirus.
XX
RN [1]
RP 1-4152
RA Mo X., Qin X., Tan Z., Li T., Wu J., Chen H.;
RT "First Report of Tobacco Bushy Top Disease in China";
RL Plant Dis. 86:74-74(2002).
XX
RN [2]
RP 1-4152
RX MEDLINE; 22444054.
RX PUBMED; 12557001.
RA Mo X.H., Qin X.Y., Wu J., Yang C., Wu J.Y., Duan Y.Q., Li T.F., Chen H.R.;
RT "Complete nucleotide sequence and genome organization of a Chinese isolate
RT of tobacco bushy top virus";
RL Arch. Virol. 148(2):389-397(2003).
XX
RN [3]
RP 1-4152
RA Mo X., Qin X., Wu J., Li T., Chen H.;
RT ;
RL Submitted (25-JUL-2001) to the EMBL/GenBank/DDBJ databases.
RL Biotechnology Lab., Yunnan Academy of Tobacco Science, Keyi Road, Kunming
RL City, Yunnan Province 650106, P.R. China
XX
RN [4]
RC Sequence update by submitter
RP 1-4152
RA Mo X., Qin X., Wu J., Li T., Chen H.;
RT ;
RL Submitted (19-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL Biotechnology Lab., Yunnan Academy of Tobacco Science, Keyi Road, Kunming
RL City, Yunnan Province 650106, P. R. China
XX
DR GOA; Q8V3U5; Q8V3U5.
DR SPTREMBL; Q8V3U5; Q8V3U5.
XX
CC On Nov 4, 2002 this sequence version replaced gi:18182320.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4152
FT /country="China"
FT /db_xref="taxon:184020"
FT /organism="Tobacco bushy top virus"
FT /isolate="Ch"
FT CDS 11. .958
FT /codon_start=1
FT /note="orf1"
FT /product="unknown"
FT /protein_id="AAN62862.1"
FT /translation="MEFINKIKQLLAMNFKPSKGVMSREELREAFDPTWELLITQARVT
FT NEVSRQCEDWYTLAVPTTYRLPELAVEEAVREKNIAREVAVKCPPEDPIPAIPQGSQPV
FT PLVMSSERSSQDAEREALDEIWGLPTPESHPLPKYFERRYQALARTCEKDYSNWQIVPY
FT TGGPRVLREEDVLPMASGVIPLPPPPPKASVIGAVLGLITRLTKVAGEVKSRLSVPPRE
FT PSPTCIGLEQVAGEPMGYMNAHSVAMELRARYGVQPATAANLQLGNRVAREILEKQCGA
FT TRDMVFILGHLATTLWFTPTMVDLALQCGPKDFC"
FT CDS 934. .2607
FT /codon_start=1
FT /note="orf2"
FT /product="RNA-dependent RNA polymerase"
FT /protein_id="AAN62863.1"
FT /translation="MWAQGFLLGDVVARRGVETKVKTKIHPKIRVLRAARPRPVERVSY
FT QIDVVRPCADFGVHNNSLNNLVRGVNERVFYTDHKRKEPRRPSAGSFDKIDISEIKAFR
FT VQPWTLEEVVDSYTGSQRVRYGQAVESLAVTPLSRNDARVKTFVKAEKINFTAKPDPAP
FT RVIQPRDPRFNACFAKYTKPLEPLLYKQLGKLYQFPCIAKGFNAVETGEIVAKKWKCFS
FT DPVCVGLDASRFDQHVSCDALRFTHSVYKRFVKGREVNKLLSWMYKNHALGSAKDGFVK
FT YEVEGCRMSGDMDTALGNCVLMVLMTRQLCKNLSIPHELMNNGDDCIVIFDRQYLSTFQ
FT DAVEPWFRELGFTMKVEEPVYHLERVDFCQTRPVYDGKKWRMVRHISSIAKDCCSVIDW
FT EQLPAWWNAIGECGIAVAGGIPIHNSFLRWLLRSGESNPDLLKHGAWKNEGLAWYRMGM
FT DLSHERHVSDEARASFHTAFGIEPSMQVALEQIYDSLPAPTIGGKRARVCKPGEMVLVD
FT SLPPRHFNDYFQDVGIGGSSSDYVVPGTHEFEPGTLWTQC"
FT CDS 2757. .3470
FT /codon_start=1
FT /db_xref="GOA:Q8V3U5"
FT /db_xref="SPTREMBL:Q8V3U5"
FT /note="orf3"
FT /product="unknown"
FT /protein_id="AAL65130.2"
FT /translation="MSTIINVNTHPQGRYERGAAQRSIRGSDVKGARGIKPRRSNPPSG
FT RKQGGNDPTAATQKSRKNRQRPETVPPHETHGGTFIHREGCGGVHAPHPGRCWRRGRNL
FT GPRQHATTPKQRWAPRKISDERRAQVDSILSPLLDTLKLSSEGGAPELLHCIGVLRREL
FT RRRREPVQPVHNVGTEDRVRSAQLSDEAPQSNANLQTSGEGQSVLPNPDSGGTEKCNVE
FT SVCNNCDRAPTTNKW"
FT CDS 2773. .3507
FT /codon_start=1
FT /note="orf4"
FT /product="unknown"
FT /protein_id="AAN62864.1"
FT /translation="MSTLIHKADTKEELLNALYGEVTLRELEESNLGVLTPHRAENKVV
FT MTPLLPPRSQGRIASVLKRFRPTKHTGGLLFIEKVVVVFTPHIPDDAGGEVEIWVHDNM
FT LPHLNSVGPRVRFPMSGGPRLIAFYPPYSIPLSCQVRGAPRSYFIVSEYSGVNFVAGAS
FT PFSLYIMWEPKIECVAHNYLMRPPKAMPICRHLVKDSLSSLTLTQGALKSAMSNRYATT
FT ATGLPPPTSGEQDMEVVSHPPG"
XX
SQ Sequence 4152 BP; 1001 A; 1083 C; 1203 G; 865 T; 0 other;
AF402620 Length: 4152 February 19, 2003 09:05 Type: N Check: 138 ..
1 aggttacgat atggagttca tcaacaagat aaagcaattg ttggcaatga
51 atttcaagcc ctcaaagggc gtaatgtctc gggaggagct ccgtgaagct
101 ttcgatccca cttgggagct cctcatcaca caggcccgtg tcaccaatga
151 ggtgtcacgc cagtgtgagg attggtacac tctagctgta cccaccacct
201 accgcttgcc agagttggcg gtagaagagg ctgtgcgtga aaagaacata
251 gcgcgagagg tggcggtcaa gtgcccccct gaggacccga ttcctgcaat
301 cccgcagggg tcacagcctg tccccttggt gatgagctct gaacgctcta
351 gccaggatgc cgagcgtgag gcgctcgatg agatatgggg gctccccact
401 cccgagtcac atcctctgcc caagtacttc gagcggcgct accaggcgct
451 ggctcggacc tgcgagaagg actactccaa ctggcagatt gtaccctaca
501 cgggtgggcc acgcgtgctg agagaggagg acgtgctacc aatggcttcg
551 ggggttatac ccttgccacc acccccccct aaggcttctg taatcggagc
601 agtcttgggg ctgattaccc gccttaccaa ggtggcgggg gaggtgaaga
651 gcaggctgag cgtaccgccg cgggagccct cgcccacttg cattggctta
701 gagcaggtgg ctggtgagcc catgggctac atgaatgcac actctgtggc
751 catggagttg cgggctaggt acggagtcca gcccgccaca gctgcgaact
801 tgcagcttgg aaaccgggtg gccagggaaa tcctggaaaa acagtgcggg
851 gccacccgcg acatggtgtt catactcggg cacctcgcca ccaccttgtg
901 gttcacccct accatggtgg acttggccct tcaatgtggg cccaaggatt
951 tttgctaggg gatgtggtcg ctcggagggg tgtagaaact aaagtgaaga
1001 cgaaaatcca ccccaaaatc cgagtgctta gggcggcccg tccccggccc
1051 gtagaaagag tgtcgtacca aatcgacgtg gtgcggccct gtgctgactt
1101 tggagtccac aacaactccc tcaacaattt agtgcgaggg gttaacgagc
1151 gggtgttcta cacagaccac aagaggaaag agccccgcag accttcagct
1201 ggtagttttg acaagattga catcagcgag ataaaagcgt tcagagtcca
1251 gccgtggact ctcgaggagg tcgttgacag ctacacgggt agccagaggg
1301 tgcggtatgg acaagctgtt gaatccttag cagtaacgcc cctctcacga
1351 aacgacgccc gggtcaaaac atttgtaaag gcggaaaaga taaacttcac
1401 cgccaagccc gacccggctc ctcgcgtaat ccagccgcgg gatccaaggt
1451 tcaatgcctg ctttgccaaa tacacaaagc ccttggaacc cctcctatac
1501 aagcagctgg gtaagcttta ccagttccca tgcatcgcaa aaggctttaa
1551 cgccgtagag accggagaga tagtagccaa gaagtggaag tgcttcagtg
1601 accctgtctg tgtgggttta gatgcctccc ggtttgacca gcatgtgtca
1651 tgcgatgcac tacggttcac ccatagcgtg tacaaacggt tcgtgaaggg
1701 cagggaagtg aacaagttgc tttcctggat gtacaaaaac cacgctctgg
1751 gaagtgcgaa ggacggattc gtcaagtacg aggtggaagg ctgtcggatg
1801 agtggggata tggatacagc cctagggaat tgtgtcctga tggtcctcat
1851 gactaggcaa ctatgcaaga acctctccat accgcacgaa ctgatgaaca
1901 acggcgacga ctgcatagtt atatttgaca ggcagtacct gtccaccttt
1951 caggatgcag tcgagccttg gtttagggag ctagggttta caatgaaggt
2001 cgaggagcca gtctaccatc tcgaaagagt agatttttgc cagacccgcc
2051 ccgtgtatga cggcaagaag tggagaatgg tcaggcatat ctcaagtata
2101 gcgaaggatt gctgttcagt cattgactgg gaacagttac cggcttggtg
2151 gaacgccatt ggagaatgtg gcattgccgt ggctggtggt atacccatac
2201 acaacagctt cttgagatgg ctcctgagat caggtgagag caaccctgat
2251 ctcctgaagc atggcgcatg gaaaaatgag ggcctagcgt ggtaccggat
2301 gggcatggac ctatcccatg agagacacgt tagtgatgaa gcgcgcgcca
2351 gcttccacac tgcctttgga atcgaaccat ccatgcaggt cgcattagag
2401 cagatctatg actcattgcc tgctcccacc attggtggga aacgagccag
2451 agtgtgtaaa cctggtgaaa tggtattggt tgattcactc ccaccgcggc
2501 actttaatga ttacttccag gatgttggaa taggggggag tagcagtgat
2551 tacgttgtcc cggggaccca cgagttcgaa ccggggacgt tgtggacaca
2601 atgctagtca attgagtcag ccaggcatat ggttgcaagc gctggggact
2651 tagtccataa aaccactggt aaagagcctc cagtaggcag gcccgccttg
2701 atgagtctta acgagtggac acccgggtag ccgcggacaa tgcccgacgg
2751 gtttcaatgt ctacgatcat aaatgtcaac actcatccac aaggcagata
2801 cgaaagagga gctgctcaac gctctatacg gggaagtgac gttaagggag
2851 ctcgaggaat caaacctcgg cgttctaacc ccccatcggg ccgaaaacaa
2901 ggtggtaatg accccactgc tgccacccag aagtcaagga agaatcgcca
2951 gcgtcctgaa acggttccgc cccacgaaac acacgggggg acttttattc
3001 atagagaagg ttgtggtggt gttcacgccc cacatcccgg acgatgctgg
3051 cggagaggta gaaatctggg tccacgacaa catgctacca cacctaaaca
3101 gcgttgggcc ccgcgtaaga tttccgatga gcggagggcc caggttgata
3151 gcattttatc ccccctactc gataccctta agttgtcaag tgaggggggc
3201 gccccggagc tacttcattg tatcggagta ctccggcgtg aacttcgtcg
3251 caggcgcgag cccgttcagc ctgtacataa tgtgggaacc gaagatagag
3301 tgcgtagcgc acaactatct gatgaggccc cccaaagcaa tgccaatttg
3351 cagacatctg gtgaaggaca gtctgtcctc cctaaccctg actcaggggg
3401 cactgaaaag tgcaatgtcg aatcggtatg caacaactgc gaccgggctc
3451 ccaccaccaa caagtggtga gcaggatatg gaggtagtgt cccatcctcc
3501 aggctaaatt ggacacaaaa cggagctaga tttagtgttg caattgctag
3551 accgttagcc actacgccag acagtgcgat aactgaggtc gtctatgacc
3601 cacagggtgc catcctgtgc aatttccaac ccttggcagg ggtgatccta
3651 gaggacgcgg gcattgactt gcctggggat gcttctagtt acataccgga
3701 gtggttgata gacctctgtg taaggaaaca ggtgtgagac tggatcctgg
3751 gaaacaggct gggatggtcc cgtaagttcg ggcggtgccc ttcgggggta
3801 accccaccgc cgacgtatca cctcacacgc tgttggccga taagccgagg
3851 tgttggaacc gcaccactct ggaggttccc tctccttatg aggtggaggc
3901 acagcacgcc ttaagtgtct gcgatccggc gttcacgtgc cggtggtccc
3951 cctagttaac gtggtgccac agtctgtggt aggggcagct ggtcggattc
4001 cagcagaaac caagtagcaa atggacgttg ctacctcgag cctagagtca
4051 tgggcccgca tcgacgtttg cggtaactca cagcgggcga taatagctgt
4101 tgagaatgtc ggttcctgac ttagcgggag atgagcactt tctctcgcgc
4151 cc