Sequence of DPV Aquareovirus C

Golden shiner reovirus segment 9 non-structural protein NS2 gene, complete cds.

ACC No: AF403406

Dated: 2002-08-12 | Length: 1130 | CRC: -2130471605

                !!NA_SEQUENCE 1.0
ID   AF403406   standard; RNA; VRL; 1130 BP.
XX
AC   AF403406;
XX
SV   AF403406.1
XX
DT   12-AUG-2002 (Rel. 72, Created)
DT   12-AUG-2002 (Rel. 72, Last updated, Version 1)
XX
DE   Golden shiner reovirus segment 9 non-structural protein NS2 gene, complete
DE   cds.
XX
KW   .
XX
OS   Golden shiner reovirus
OC   Viruses; dsRNA viruses; Reoviridae; Aquareovirus; Aquareovirus C.
XX
RN   [1]
RP   1-1130
RX   PUBMED; 12124458.
RA   Attoui H., Fang Q., Jaafar F.M., Cantaloube J.F., Biagini P., De Micco P.,
RA   De Lamballerie X.;
RT   "Common evolutionary origin of aquareoviruses and orthoreoviruses revealed
RT   by genome characterization of Golden shiner reovirus, Grass carp reovirus,
RT   Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family
RT   Reoviridae)";
RL   J. Gen. Virol. 83(Pt 8):1941-1951(2002).
XX
RN   [2]
RP   1-1130
RA   Attoui H., de Micco P., de Lamballerie X.;
RT   ;
RL   Submitted (30-JUL-2001) to the EMBL/GenBank/DDBJ databases.
RL   Virologie, Faculte de Medecine de Marseille, 27 Boulevard Jean Moulin,
RL   Marseille 13005, France
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1130
FT                   /db_xref="taxon:185783"
FT                   /note="Golden shiner reovirus segment: 9"
FT                   /organism="Golden shiner reovirus"
FT   CDS             32. .1090
FT                   /codon_start=1
FT                   /product="non-structural protein NS2"
FT                   /protein_id="AAM92753.1"
FT                   /translation="MAHTGTATLINAERTDRTLRLLETFPSLTITIRQDTSGRDLVSSV
FT                   YSATGMSAAARNLNPIANVKNMRQPGYVKPAHTATNTVPLRVATSTGLELPTAHLAQMP
FT                   VDQALRDAVAAAVPAHAARVLPPNVDRVTPLTLASRVAMVCAGLDCDDIHEIAPAPTAM
FT                   ALAFTTKVLLIHVVVDGTGASIAVNPGAARDLLKADQLGNVITNYGYDVRGTVRRDTAA
FT                   ALAPSELPDTYPIEWLGLICGLIATQIELDLDMLAMNQTEQKLIAPHVQAVDPFINRLQ
FT                   SYATLSSRLMHLCVTHAQRPFRDFPELLRHWQKPELTPAIPVNIALKGAALEVSGNGAE
FT                   LFRVRALPIGGM"
XX
SQ   Sequence 1130 BP; 222 A; 384 C; 267 G; 257 T; 0 other;

AF403406  Length: 1130  August 20, 2002 12:26  Type: N  Check: 5733  ..

       1  gttattttga gcttaccgat tgacaaccat catggcacac acaggcaccg
      51  ctactctgat caatgccgag cgcacagatc gaactctccg cctcctcgaa
     101  acttttcctt ccctgacaat caccatcaga caggacacgt ccgggcgtga
     151  tctcgtgtct tccgtgtact ccgcgactgg tatgtctgcc gcagctcgaa
     201  acttgaaccc catcgccaac gtcaagaaca tgcgccaacc cggctacgtc
     251  aagcccgccc acaccgctac taacactgtc ccactccgcg tcgccacctc
     301  caccggcttg gaactcccca ctgctcatct cgcccagatg cccgttgacc
     351  aagcgctgcg tgatgccgtt gccgctgccg ttcccgccca tgctgcacgc
     401  gtgttgcccc cgaacgtcga ccgggtcact cctctaacgc tcgcctctcg
     451  cgtagccatg gtctgcgctg gtctcgactg tgacgatatc cacgagattg
     501  ctcctgctcc taccgctatg gcactggcat tcactaccaa agttctttta
     551  attcacgtcg tcgttgatgg aactggcgcg tctattgccg tcaaccccgg
     601  tgccgctcgt gacttgctga aggcagacca gcttggtaat gtcatcacta
     651  attatggtta tgatgtccgg ggaaccgtgc gacgtgacac cgctgccgct
     701  ctggcgcctt ctgaactacc cgacacctat cccatcgagt ggctgggtct
     751  catctgcggt ctaatcgcga ctcagatcga gttggacctt gacatgctgg
     801  ccatgaatca gactgagcag aagctcatcg cgccccacgt tcaggctgta
     851  gatccattta tcaaccgcct gcaaagctac gccactctct cctctcgtct
     901  gatgcatcta tgtgtcactc acgcccaaag gccattccgt gacttccccg
     951  aactgcttcg ccactggcag aaaccggagt tgacccccgc catacccgtt
    1001  aacatcgccc tgaaaggagc tgccctagag gtatcgggta acggcgctga
    1051  gttgtttcgc gtgagggcct tgccgatcgg aggtatgtaa gggtgtggtc
    1101  accacccgca tgccgctcag agctatcatc