Sequence of DPV Infectious salmon anemia virus

Infectious salmon anemia virus segment 4 putative PA protein (P2) gene, complete cds.

ACC No: AF404344

Dated: 2002-01-25 | Length: 1787 | CRC: -745381847

                !!NA_SEQUENCE 1.0
ID   AF404344   standard; RNA; VRL; 1787 BP.
XX
AC   AF404344;
XX
SV   AF404344.1
XX
DT   25-JAN-2002 (Rel. 70, Created)
DT   25-JAN-2002 (Rel. 70, Last updated, Version 1)
XX
DE   Infectious salmon anemia virus segment 4 putative PA protein (P2) gene,
DE   complete cds.
XX
KW   .
XX
OS   Infectious salmon anemia virus
OC   Viruses; ssRNA negative-strand viruses; Orthomyxoviridae;
OC   unclassified Orthomyxoviridae.
XX
RN   [1]
RP   1-1787
RX   PUBMED; 11807235.
RA   Clouthier S.C., Rector T., Brown N.E., Anderson E.D.;
RT   "Genomic organization of infectious salmon anaemia virus";
RL   J. Gen. Virol. 83(Pt 2):421-428(2002).
XX
RN   [2]
RP   1-1787
RA   Clouthier S.C., Rector T., Brown N.E., Anderson E.D.;
RT   ;
RL   Submitted (01-AUG-2001) to the EMBL/GenBank/DDBJ databases.
RL   Biochemistry, Microbiology and Molecular Biology, University of Maine, 5735
RL   Hitchner Hall, Orono, ME 04469, USA
XX
DR   SPTREMBL; Q8V3T8; Q8V3T8.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1787
FT                   /country="Canada"
FT                   /db_xref="taxon:55987"
FT                   /note="segment: 4"
FT                   /virion
FT                   /organism="Infectious salmon anemia virus"
FT                   /isolate="CCBB"
FT   CDS             5. .1741
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q8V3T8"
FT                   /gene="P2"
FT                   /product="putative PA protein"
FT                   /protein_id="AAL67960.1"
FT                   /translation="MDNLRECINRKRRLLALPDVPETSDAFLSDLRHLYMCVAFCDQHK
FT                   TTGDESRFTNLELLDQDEALGAQRAFEAKHGIKGGSLGDVLDHELKKVIEFTFTSGSLY
FT                   IAEQRKRKTQADSIIVCVSEGLNDFSVSHGVLDMGLVETGVNAVRDFCTQNGIPMKINQ
FT                   VGSTRTPTPISTCKISEQITRQINSTITERKMETVLAAIAIKPELKXTQKGCXXCKELE
FT                   DENILWMDPQFCEIDESFPYRGGPYGNFLQELLLTTNDVETNGKDREEVVKXILDNKAF
FT                   TVESGECIITLPDKMTCFGEQEKKRPATIDEVRTAGERFEQSVKPKTQRYGRLSDKWME
FT                   LEKFIFTASKTEVDTFLSVGTERLESVGVCVGALHRATTTRIIRPMIQGGKCWGMMFKT
FT                   KSKMGDTRKEGYCHAIIFGKGEDKSGQNKMTMMGKTVHWHLRVVKSKGDWMAQQLCANK
FT                   SRIWQHDPELVTEGVTVLMTPFSQKIATISRWRAMRLDSMFHVSSAWHHSPACEAASAM
FT                   LRKFVEIVHAINQKRDWGVVGSMEDMVKEVEEIGEHLQTACDFRVYNXCKALIQKIAVS
FT                   TQ"
XX
SQ   Sequence 1787 BP; 634 A; 305 C; 435 G; 404 T; 9 other;

AF404344  Length: 1787  October 1, 2002 09:16  Type: N  Check: 2318  ..

       1  caagatggat aacctccgtg aatgcataaa ccgcaaaaga agactacttg
      51  ccttaccaga tgttcctgaa acttcggatg cctttctaag tgatttgaga
     101  catctataca tgtgtgttgc tttctgtgat caacacaaaa ccactggaga
     151  cgaatcaaga ttcaccaacc tggaattact tgaccaagat gaagcactag
     201  gtgcccaaag agcttttgaa gccaaacatg gaataaaagg aggttcttta
     251  ggagacgttc ttgaccatga actgaaaaag gtcattgaat ttacttttac
     301  ttctggaagt ttgtatattg ccgaacaaag aaaaagaaag actcaagcag
     351  actcaataat tgtgtgcgtt tcagaaggac ttaacgactt cagcgtatca
     401  cacggagtgc tagacatggg acttgtggaa acaggggtga atgcagtaag
     451  agatttctgc acacaaaacg gaataccaat gaagataaat caggtaggat
     501  ccacgagaac accaacaccg atcagcacat gcaaaatctc tgaacaaata
     551  acacgacara taaacagtac aattactgaa aggaaaatgg aaacagtact
     601  ggcagcaatc gcaattaaac cagaactcaa ayyaactcag aaaggatgca
     651  gmmcttgtaa agaactagaa gatgaaaata ttctgtggat ggaccctcaa
     701  ttctgtgaaa ttgatgaaag ttttccttac agaggagggc catacgggaa
     751  cttcctgcaa gaattgctgc ttacaaccaa cgacgtagag accaacggga
     801  aagacagaga agaagtagta aagaasatac tggataacaa ggcgttcacc
     851  gttgaaagtg gtgaatgcat aataacactt ccagacaaaa tgacttgttt
     901  cggagaacar gagaagaaga gaccagcaac aatagacgaa gtgagaaccg
     951  caggagaaag gtttgaacag agtgttaaac cgaaaaccca aagatatgga
    1001  aggttatcag acaaatggat ggagcttgaa aagtttatct ttactgcaag
    1051  caaaacagaa gtggatactt tcctttctgt agggaccgaa agacttgagt
    1101  cggttggagt gtgtgtcgga gctttacaca gagcgaccac aaccaggata
    1151  attagaccta tgattcaagg agggaaatgt tgggggatga tgttcaaaac
    1201  aaagtccaaa atgggagaca cgaggaagga aggatactgt cacgcaatca
    1251  ttttcggaaa aggggaagat aaatcaggac aaaacaagat gacaatgatg
    1301  gggaaaacag tacattggca tctaagagta gttaagtcta aaggagactg
    1351  gatggcgcaa caactctgtg caaacaaaag cagaatatgg caacatgacc
    1401  ctgagctagt aacagaagga gtgacagttc taatgacgcc tttttctcag
    1451  aaaattgcaa ccattagtag atggagggca atgaggttag acagcatgtt
    1501  tcatgtttct agtgcctggc atcattcacc tgcgtgtgaa gctgcatcgg
    1551  caatgctgag aaagtttgtg gagatagtac atgccatcaa ccagaaaaga
    1601  gattggggtg ttgtggggag tatggaggac atggtgaagg aagtggagga
    1651  aataggggag cacttgcaga cggcatgtga ytttagagtt tacaacatkt
    1701  gcaaagcctt gattcagaaa attgcagtca gtacccaatg agtggttatt
    1751  tacttgtaaa ttgttgtgtg tttgacgata tgtattt