Sequence of DPV Turnip mosaic virus

Turnip mosaic virus isolate ITA 6 coat protein gene, partial cds.

ACC No: AF434723

Dated: 2002-11-07 | Length: 867 | CRC: 1518717926

                !!NA_SEQUENCE 1.0
ID   AF434723   standard; RNA; VRL; 867 BP.
XX
AC   AF434723;
XX
SV   AF434723.1
XX
DT   07-NOV-2002 (Rel. 73, Created)
DT   07-NOV-2002 (Rel. 73, Last updated, Version 1)
XX
DE   Turnip mosaic virus isolate ITA 6 coat protein gene, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-867
RA   Sanchez F., Wang X., Jenner C.E., Walsh J.A., Ponz F.;
RT   "Strains of Turnip mosaic potyvirus as defined by the molecular analysis of
RT   the coat protein gene of the virus";
RL   Unpublished.
XX
RN   [2]
RP   1-867
RA   Sanchez F., Wang X., Jenner C.E., Walsh J.A., Ponz F.;
RT   ;
RL   Submitted (16-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Biotecnologia, INIA, Autopista A-6 Km 7.5, Madrid 28040, Spain
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .867
FT                   /db_xref="taxon:12230"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ITA 6"
FT                   /specific_host="Matthiola incana"
FT   CDS             <1. .867
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AAN63602.1"
FT                   /translation="AGETLDAGLTEEQKQAEKERKDREKAEKEREKQKQLALKKGKNSS
FT                   QEEGERDKEVNAGTSGTFSVPRLKSLASKMRVPKYEKRLALNLDHLILYTPEQTDLSNT
FT                   RSTQKQFNTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
XX
SQ   Sequence 867 BP; 288 A; 171 C; 226 G; 182 T; 0 other;

AF434723  Length: 867  November 28, 2002 09:55  Type: N  Check: 6281  ..

       1  gcaggcgaaa cacttgatgc tggcctgaca gaggagcaaa aacaagcgga
      51  aaaagaaagg aaagataggg agaaggcgga gaaagagcga gagaaacaga
     101  agcagcttgc actcaagaaa ggtaagaact catcacaaga agagggagaa
     151  cgagataaag aagtcaatgc tgggacctct ggaaccttca gtgtacctag
     201  gcttaagagt ctagcaagta aaatgcgagt gccaaagtat gagaaaaggc
     251  tagctctcaa tcttgatcat ctaatccttt acaccccaga acagacagat
     301  ttgtccaaca cacgttcgac acagaagcaa ttcaacacat ggtttgaggg
     351  tgtcatggct gattatgagt taacagagga taagatgcaa ataattctca
     401  atggtttgat ggtctggtgc attgagaatg gaacctcccc gaatataaac
     451  ggaatgtggg tgatgatgga tggtgatgat caggtggaat tcccgatcaa
     501  accgctcatt gatcacgcca agcccacatt taggcagata atggcccatt
     551  tcagtgacgt cgctgaagcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgtaat ttaaccgaca tgagcttggc
     651  tcgttacgcg tttgatttct atgagatgac ttctagaact ccaatacgtg
     701  cgagagaggc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aacaatttgt tcggattgga tggtaacgtt ggcacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttaaggg gttatga