Sequence of DPV Turnip mosaic virus

Turnip mosaic virus isolate JPN 1 coat protein gene, partial cds.

ACC No: AF434724

Dated: 2002-11-07 | Length: 867 | CRC: -483633234

                !!NA_SEQUENCE 1.0
ID   AF434724   standard; RNA; VRL; 867 BP.
XX
AC   AF434724;
XX
SV   AF434724.1
XX
DT   07-NOV-2002 (Rel. 73, Created)
DT   07-NOV-2002 (Rel. 73, Last updated, Version 1)
XX
DE   Turnip mosaic virus isolate JPN 1 coat protein gene, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-867
RA   Sanchez F., Wang X., Jenner C.E., Walsh J.A., Ponz F.;
RT   "Strains of Turnip mosaic potyvirus as defined by the molecular analysis of
RT   the coat protein gene of the virus";
RL   Unpublished.
XX
RN   [2]
RP   1-867
RA   Sanchez F., Wang X., Jenner C.E., Walsh J.A., Ponz F.;
RT   ;
RL   Submitted (16-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Biotecnologia, INIA, Autopista A-6 Km 7.5, Madrid 28040, Spain
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .867
FT                   /db_xref="taxon:12230"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="JPN 1"
FT                   /specific_host="Raphanus sativus"
FT   CDS             <1. .867
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AAN63603.1"
FT                   /translation="AGETLDAGPTEEQKQAEKERKERERSEKERERQRQLALKKGKNAA
FT                   QEEGERDNEANAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
XX
SQ   Sequence 867 BP; 286 A; 180 C; 229 G; 172 T; 0 other;

AF434724  Length: 867  November 28, 2002 15:29  Type: N  Check: 3017  ..

       1  gcaggtgaga cgcttgatgc cggtccaaca gaagagcaga agcaggctga
      51  aaaggagaga aaggagagag agagatcaga gaaagagcga gaaaggcaaa
     101  gacagctagc gcttaagaaa ggcaaaaacg cagcacaaga agagggcgaa
     151  cgtgacaatg aagcaaacgc cggaacttcc ggaactttta gcgtgcctag
     201  actcaaaagt cttacaagca aaatgcgtgt gccgaagtat gagaaaagag
     251  tcgctctcaa cctcgatcat ttgatcttat acacgccgga gcagacagat
     301  ttatccaaca cgcgttcaac gcggaagcag tttgacactt ggtttgaagg
     351  tgtcatggct gactatgagc taacggagga taaaatgcaa ataattctca
     401  atggtttaat ggtctggtgc attgagaatg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgcg tttgatttct atgaaatgac ttctagaact ccaatacgtg
     701  cgagagaagc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aacaatttgt tcggcttgga tggaaacgtt ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttaaggg gttatga