Sequence of DPV Turnip mosaic virus

Turnip mosaic virus isolate PRT 1 coat protein gene, partial cds.

ACC No: AF434725

Dated: 2002-11-07 | Length: 867 | CRC: 1856989011

                !!NA_SEQUENCE 1.0
ID   AF434725   standard; RNA; VRL; 867 BP.
XX
AC   AF434725;
XX
SV   AF434725.1
XX
DT   07-NOV-2002 (Rel. 73, Created)
DT   07-NOV-2002 (Rel. 73, Last updated, Version 1)
XX
DE   Turnip mosaic virus isolate PRT 1 coat protein gene, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-867
RA   Sanchez F., Wang X., Jenner C.E., Walsh J.A., Ponz F.;
RT   "Strains of Turnip mosaic potyvirus as defined by the molecular analysis of
RT   the coat protein gene of the virus";
RL   Unpublished.
XX
RN   [2]
RP   1-867
RA   Sanchez F., Wang X., Jenner C.E., Walsh J.A., Ponz F.;
RT   ;
RL   Submitted (16-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL   Biotecnologia, INIA, Autopista A-6 Km 7.5, Madrid 28040, Spain
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .867
FT                   /db_xref="taxon:12230"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="PRT 1"
FT                   /specific_host="Brassica oleracea"
FT   CDS             <1. .867
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AAN63604.1"
FT                   /translation="AGETLDAGQTEEQKQAEKERREKEKAEKERERQKQLALKKGKDTA
FT                   QEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEKKVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVQGL"
XX
SQ   Sequence 867 BP; 284 A; 187 C; 232 G; 164 T; 0 other;

AF434725  Length: 867  November 28, 2002 09:55  Type: N  Check: 8478  ..

       1  gcaggtgaga cgcttgatgc aggtcagaca gaagagcaga agcaagcaga
      51  gaaggagaga agggagaaag aaaaggcaga aaaagagcga gagaggcaaa
     101  agcagttagc actcaagaaa ggcaaagaca ccgcgcaaga agagggaaaa
     151  cgcgacaagg aagttaacgc tggaacctct ggaactttca gcgtgcccag
     201  actcaagagt ctcacgagca aaatgcgagt accaaggtat gagaagaagg
     251  tagctctcaa tctcgatcac ctaattctct acacaccgga gcagacggat
     301  ctatccaaca cgcgctcgac acgcaagcag tttgacactt ggttcgaagg
     351  tgttatggct gattacgagc tgacggaaga taaaatgcaa ataattctca
     401  atggtttaat ggtctggtgc attgagaatg gaacctcccc aaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgaccg
     601  tacatgccac gatatggtct tcagcgcaac ttaaccgaca tgagcttagc
     651  tcgttacgca tttgatttct acgaaatgac ttctagaact ccgatacgtg
     701  cgagagaggc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aataatttgt tcggcttgga tggtaacgtt ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcac aacttacttg
     851  gcgttcaggg gttgtga