Sequence of DPV Plum pox virus
Plum pox virus clone Chile20 polyprotein gene, NIb and CP regions, partial cds.
ACC No: AF440745
Dated: 2001-11-26 | Length: 1374 | CRC: -415464326
!!NA_SEQUENCE 1.0
ID AF440745 standard; RNA; VRL; 1374 BP.
XX
AC AF440745;
XX
SV AF440745.1
XX
DT 26-NOV-2001 (Rel. 69, Created)
DT 26-NOV-2001 (Rel. 69, Last updated, Version 1)
XX
DE Plum pox virus clone Chile20 polyprotein gene, NIb and CP regions, partial
DE cds.
XX
KW .
XX
OS Plum pox virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1374
RA Reyes F., Reyes M., Sepulveda P., Hinrichsen P., Herrera G., Lopez-Moya J.,
RA Prieto H.;
RT "New insights on Plum pox virus present in Chile";
RL Acta Hortic. 550:135-140(2001).
XX
RN [2]
RP 1-1374
RA Reyes F., Fiore N., Paredes V., Sepulveda P., Prieto H.;
RT "Biological behaviour and molecular characterization of six Chilean
RT isolates of Plum Pox Virus";
RL Unpublished.
XX
RN [3]
RP 1-1374
RA Reyes F., Fernandez R., Prieto H.;
RT ;
RL Submitted (30-OCT-2001) to the EMBL/GenBank/DDBJ databases.
RL Biotecnologia, INIA CRI La Platina, Av. Santa Rosa #11610, Santiago, 13
RL 7083150, Chile
XX
FH Key Location/Qualifiers
FH
FT source 1. .1374
FT /country="Chile"
FT /db_xref="taxon:12211"
FT /organism="Plum pox virus"
FT /strain="D"
FT /clone="Chile20"
FT CDS <1. .1157
FT /codon_start=3
FT /product="polyprotein"
FT /protein_id="AAL35273.1"
FT /translation="NALSKDGKAPYIAETALKKLYTDTEASETEIERYLEAFYDDINDD
FT GESNVVVHQADEREDEEEVDAGKPIVVTAPAATSPILQPPPVIQPAPRTTAPMLNPIFT
FT PATTQPATKPVSQVSGPQLQTFGTYGNEDASPSNSNALVYTNRDRDIDAGSIGTFTVPR
FT LKAMTSKLSLPKVKGKAIMNLNHLAHYSPAQVDLSNTRAPQSCFQTWYEGVKRDYDVTD
FT DEMSIILNGLMVWCIENGTSPNINGMWVMMDGETQVEYPIKPLLDHAKPTFRQIMAHFS
FT NVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHIQMKAA
FT ALRNVQNRLFGLDGNVGTQEEDTERHTAGDVNRNMHNLLGMRGV"
FT mat_peptide <1. .164
FT /product="NIb"
FT mat_peptide 165. .1154
FT /product="CP"
FT 3'UTR 1158. .1374
XX
SQ Sequence 1374 BP; 422 A; 300 C; 313 G; 339 T; 0 other;
AF440745 Length: 1374 December 21, 2001 15:34 Type: N Check: 5225 ..
1 acaatgctct ttcaaaagat ggaaaagccc cgtacattgc ggagacagca
51 ctgaagaagc tttacactga cactgaagca tctgagacag aaattgagcg
101 atatcttgaa gctttttacg acgacattaa cgatgatggt gagtccaacg
151 ttgttgtgca ccaagctgac gaaagagaag acgaggagga agttgatgca
201 ggcaagccga ttgtagttac tgcaccggca gcaactagcc caatacttca
251 accacctcca gtcatacagc ctgcaccccg gactacggcg ccaatgctca
301 accccatttt cacgccagca acaactcaac cagcaacaaa accagtttca
351 caggtgtcag gacctcaact gcaaactttt ggaacatatg gtaatgaaga
401 tgcatcacct agcaactcaa acgcactagt ctacacaaac agagacaggg
451 acatcgatgc aggatcaatt ggaactttta cagtgccacg tttgaaggca
501 atgacttcga aactatctct gccaaaggtg aagggaaagg ctattatgaa
551 cttgaaccat ttggcacatt atagtcctgc acaggttgac ttgtcaaaca
601 cgagagctcc gcagtcttgt ttccaaactt ggtatgaagg agttaagcga
651 gattatgatg tcacggacga tgaaatgagc atcattttaa atggtcttat
701 ggtttggtgc atagagaatg gaacatcccc gaatatcaat ggaatgtggg
751 tgatgatgga tggggaaaca caagtggagt atccaataaa gccattgttg
801 gatcatgcga aacccacttt tagacaaatt atggcacatt tcagtaacgt
851 ggctgaagcg tatattgaaa aacgaaatta tgaaaaagca tacatgccaa
901 ggtatggaat tcagcgcaac ctgacagact acagcctcgc cagatatgcc
951 tttgattttt acgaaatgac ttcaacgaca cccgtacggg cacgtgaagc
1001 tcatatccag atgaaggcag cagcattgag aaatgttcaa aatcgtttat
1051 ttggcttgga tggaaacgtc ggaacacaag aagaggacac agagagacac
1101 accgctggtg atgttaatcg caacatgcac aacctcctcg gtatgagggg
1151 agtgtagtgg tctcggtatc tatcataaac tctacctggg tgagagtcta
1201 atcatccagt tgtttttaga ttcctgttag catccttttc tccgctttaa
1251 tagcagtaca ttcagtgagg ttctacctcc atatgttcta gtctgttatt
1301 gtcgaacaca ggcccttgta tctgatgtag cgagtgcttc actccattcg
1351 ggttatagtt cttgtgcaag agac