Sequence of DPV Peanut clump virus
Peanut clump virus M segment RNA-2 coat protein, P41, P49, P14, and P17 genes, complete cds.
ACC No: AF447400
Dated: 2003-05-29 | Length: 4658 | CRC: -969898076
!!NA_SEQUENCE 1.0
ID AF447400 standard; genomic RNA; VRL; 4658 BP.
XX
AC AF447400;
XX
SV AF447400.1
XX
DT 02-JAN-2003 (Rel. 74, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 3)
XX
DE Peanut clump virus M segment RNA-2 coat protein, P41, P49, P14, and P17
DE genes, complete cds.
XX
KW .
XX
OS Peanut clump virus M
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pecluvirus;
OC Peanut clump virus.
XX
RN [1]
RP 1-4658
RX MEDLINE; 22422427.
RX PUBMED; 12536297.
RA Naidu R.A., Sawyer S., Deom C.M.;
RT "Molecular diversity of RNA-2 genome segments in pecluviruses causing
RT peanut clump disease in West Africa and India";
RL Arch. Virol. 148(1):83-98(2003).
XX
RN [2]
RP 1-4658
RA Naidu R.A.;
RT ;
RL Submitted (14-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, University of Georgia, Miller Plant Sciences Building,
RL Athens, GA 30602, USA
XX
DR GOA; Q8B0Y1.
DR GOA; Q8B0Y3.
DR SPTREMBL; Q8B0X9; Q8B0X9.
DR SPTREMBL; Q8B0Y0; Q8B0Y0.
DR SPTREMBL; Q8B0Y1; Q8B0Y1.
DR SPTREMBL; Q8B0Y2; Q8B0Y2.
DR SPTREMBL; Q8B0Y3; Q8B0Y3.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4658
FT /db_xref="taxon:188885"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Peanut clump virus M"
FT /strain="M"
FT /segment="RNA-2"
FT CDS 564. .1241
FT /codon_start=1
FT /db_xref="GOA:Q8B0Y3"
FT /db_xref="SPTREMBL:Q8B0Y3"
FT /product="coat protein"
FT /protein_id="AAO15512.1"
FT /translation="MPNINLGHLGGGHYFEDVFEQKIYDAGIDSDWWIESEAYDKLLAG
FT LRAINFEVNSSRQQVAQLINHVDKDLPANPGVRFPKHRGTLGHADYRPLRFRRIDAQTR
FT AYFEALVRISDQGKSRDAEVNRPTAPTIASNSAGTSLANNRGVNVVRDDQPLRDGAQNF
FT GHTFGYIALANPPSYNQKKFESDFTLTWTATGTSGTGSTTGTGTGTGSGARPATTGNTG
FT GAP"
FT CDS 1241. .2311
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8B0Y2"
FT /product="P41"
FT /protein_id="AAO15513.1"
FT /translation="MGTLNLDDPSLFVVPGRDFSTAQGYLRVFKCPSYNSKSNFVSSDF
FT EWVGDIDVLRLDPIYDGSGIMLTKQTTTHTDLYVTPCSCPIDGNDLVRLYNRLVKHFEI
FT VNNAGQVMLALSKEHEVKEVDSNGAIVVVSQYVRCADVFLWSDFGAPKDPKLCKLYARF
FT KLFTNVAVDNLQSELDACRARTSPSNPAGTSEHDDLKKQLKDVQAKLSDKERELKEERE
FT KVKRLKDDLADCRKKGEAPSAVDWKSKYEKTYAELTAESQKNTRLNNELIDTAVERDKI
FT QEQLSECEREKERFRRAVNDNAVLADKRLIAIREIKAQLITQLENTTRYGWGVSWFHSW
FT VRGYVDRIDSINGSVS"
FT CDS 2446. .3741
FT /codon_start=1
FT /db_xref="GOA:Q8B0Y1"
FT /db_xref="SPTREMBL:Q8B0Y1"
FT /product="P49"
FT /protein_id="AAO15514.1"
FT /translation="MVRKAAKVAEAMWQRKFNADKEELRKRVEGMDVNATTDYLLGRID
FT AQREAEKVFGGRLPEEKFFSKPPVDDFKVGPEKNVATKTPVKLGSDRFVGEDPLKLIAR
FT AASEAGFSPTGRVMKRFPADVFERSKFIAMYDRYLVNLREKACCEAERKRVQSKLIQLR
FT TLPPTTSFLAGTVTGVPGSGKSTLLKRIQKELPNSVCLLANKELKNDFAGVPAVFSVEE
FT MLLSAIPSHFNVMLVDEYTLMQSAEILLLQRKLEARIVVLFGDREQGNTNKLTSPEWLH
FT VPIVFCNDCSFRFGKQTAEFCKEQGFSLQGQGQEDEVIKGEYEGEGEETDINLCFTEET
FT RQDLLEVGVDALLVENVQGKTFSSVSLFVRESDKSSYSNPHLRLVAITRHRKLLVLRAD
FT PEVWVSFMFATREEEQTDTHCYGEEHSPDKTQ"
FT CDS 3707. .4072
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8B0Y0"
FT /product="P14"
FT /protein_id="AAO15515.1"
FT /translation="MVKSTVPTRPNKYWPGVVAIGLVSLFIFLSVSNQKHSTTSGDNIH
FT KFANGGTYRDGSKCITYNRNSPLAYNGSSSNNTLFWLCLLGLSMVWVAFCGYKSITGQW
FT GCQHDKRERNYLFECFD"
FT CDS 3918. .4379
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8B0X9"
FT /product="P17"
FT /protein_id="AAO15516.1"
FT /translation="MEVPVITHSSGCVCSDCQWSGSPSVAIKASQDNGDANMTSGKETT
FT FLSVLTDNILLFVIAGAMLLVFLFVNRSVVDPVVYSEFHQDLNGVSIKLAAGVPIDPAL
FT VAAVHHWQKLPFGEDPRAKVLESILHCIKSSVVLLIECVCLLAIVCHYH"
XX
SQ Sequence 4658 BP; 1224 A; 879 C; 1198 G; 1357 T; 0 other;
AF447400 Length: 4658 September 11, 2003 13:47 Type: N Check: 6753 ..
1 gtattcggtt ctcttacagt gtagcgtgaa gcggagcacg actagagacc
51 ataccatccc ttgtatccaa accatttttc taaaccttag ggtgttgaaa
101 ggtgtccgac gacggttggg agactagaga gttcggtcac tgagcaagac
151 tgggttcgtc cctgcctctc tattagggag tttcggccag tggcacgact
201 gggtgcgtcc ctgcctctct attattctga catttcgcgg attacctcta
251 tctcactgag gaaggaagtg gaaactacca tcggttggcg gttcttagat
301 cacctttgcg agtactgtgc ggttctcttc gtgagactga gattaactct
351 gcccgcacgc tacttgcgag gcctactaac cagggccgac ctttaccata
401 attaccatcg gttggcggtt tttagatcac ctttgcgagc actgtgcggt
451 tctcttcgtg agactgaggt taactctgcc cgcacgctac ttgcgaggcc
501 tactaaccag ggccgaccct taccattgat atatatataa aacaaaaata
551 atctcctttt attatgccta atatcaacct cggtcatctt ggtggcggac
601 attattttga ggacgttttt gagcagaaaa tatacgacgc cgggattgac
651 tctgactggt ggattgagag tgaggcatac gataagctgt tggcaggtct
701 cagagcgatt aattttgaag tcaatagctc taggcagcaa gtggcgcaat
751 taattaatca tgttgataaa gacttgcctg ctaatccggg tgtaaggttc
801 ccgaaacatc gtggtacgct tggtcatgcg gactatagac ccttgaggtt
851 taggcggatt gacgcgcaaa cacgcgctta ttttgaagct ttggttcgca
901 tttcagatca gggaaagtcc agggacgcag aagtgaacag accgacagct
951 ccgacgattg cttcaaattc tgctggtact agcttggcga acaaccgagg
1001 tgtgaacgtt gtgcgagacg accagccatt acgggacgga gctcagaatt
1051 tcgggcatac ttttggttat attgctctag cgaatccccc ttcttataac
1101 caaaagaaat ttgagtctga ttttactttg acttggactg ccacaggaac
1151 ttctggtact ggtagtacta ctggtacggg tactggtaca ggttctggcg
1201 ctcgtcctgc caccactggt aacaccggtg gtgctccttg atgggtactt
1251 tgaatttgga cgatccctct ctgtttgtag tcccggggag ggatttctct
1301 actgcacagg gctatttgcg tgtctttaag tgtccgtctt acaatagtaa
1351 atctaatttt gtttcgagtg attttgagtg ggttggtgat attgatgttt
1401 tacgtttaga tcctatctat gacggtagtg ggattatgtt gactaaacag
1451 accacgacgc acactgattt gtatgtgacc ccctgttctt gtcctattga
1501 tggtaacgat cttgtgagat tatataaccg tttggtaaaa cactttgaga
1551 tcgtgaataa tgccggtcag gttatgttag ctttgagtaa ggagcatgaa
1601 gtgaaagagg tagactctaa cggtgctata gttgttgtta gtcagtacgt
1651 gcgctgtgct gacgttttct tatggtcgga ttttggtgct cctaaggatc
1701 ctaagttgtg taagttgtat gctagattca agctcttcac aaacgttgct
1751 gttgataatt tgcaatcaga gctggacgct tgtagagcga gaacgtcgcc
1801 aagcaaccct gctgggacta gtgagcatga tgaccttaag aaacagctca
1851 aagatgttca ggcaaagttg tctgacaaag aaagagaact taaggaggag
1901 cgagaaaagg tgaagagact caaagatgat ctggcggatt gcagaaagaa
1951 aggggaagct cctagtgccg tggattggaa aagcaaatat gaaaagactt
2001 atgcagaatt gactgctgaa agtcagaaaa atacacgctt aaataatgag
2051 ctgatagata ctgctgtgga acgagacaag atacaagagc agctctcaga
2101 gtgtgaaaga gaaaaagaac ggtttcggag agcggttaat gataacgcag
2151 ttctagctga taaacgcctc attgcgatca gagagatcaa ggcgcagctc
2201 attacgcaac ttgagaacac tactcgttat ggttggggtg taagttggtt
2251 tcattcgtgg gttagaggtt atgttgatag aattgactct atcaatggtt
2301 ctgtgtcgtg attgatgtta tttgtttagt ttgttgtttg ttgtttttgt
2351 ttgtatgctt acaacagtgt ttctgttttt cgcatgttgt ttttgtgtct
2401 tttgattttg ttctaaggtc tttcgtttct gcacgagtga tagcaatggt
2451 taggaaagct gctaaggttg ctgaggcgat gtggcaacga aaattcaatg
2501 ctgacaaaga ggagctccgc aagagggtag aaggtatgga tgttaatgct
2551 acgactgact acttacttgg aaggatcgat gctcagagag aggcggaaaa
2601 agtttttggt ggtcgtcttc cagaagaaaa atttttctca aagccacctg
2651 ttgacgactt caaagttgga cctgagaaaa acgttgctac aaaaactcca
2701 gtgaagctag gttctgacag gtttgtcggc gaagatcctt taaagctcat
2751 tgctcgagcg gcttcggagg cgggtttctc ccccactggt agagtgatga
2801 aaagatttcc ggcggacgtt tttgaaaggt caaagtttat tgctatgtac
2851 gataggtacc tcgtgaattt gcgagaaaag gcttgttgtg aggcggagag
2901 aaaaagggta caatcgaagc ttattcagct tagaactttg ccgcccacga
2951 cttcgttcct tgctggtact gtcacaggtg tgcccgggtc tggtaagagt
3001 accctgttaa agaggattca aaaagagtta ccaaactcgg tttgtttgtt
3051 ggccaacaag gagctaaaaa atgactttgc cggtgtgccg gctgtttttt
3101 ccgttgagga gatgttgctg agtgcaattc catctcattt caacgtgatg
3151 ttggttgacg aatatacgtt gatgcaaagt gctgaaattc tgcttctaca
3201 gaggaaattg gaagctagaa ttgttgtatt atttggagat agagaacaag
3251 gtaacaccaa caagcttact agccctgaat ggttacacgt cccgatagtt
3301 ttttgcaacg attgtagttt tcgatttggt aagcagaccg cagaattttg
3351 caaagaacaa ggtttcagtt tacagggcca aggccaagaa gacgaagtta
3401 taaaaggtga gtacgagggt gagggcgagg aaactgatat aaatctatgc
3451 ttcacggagg aaaccaggca agatctatta gaagtgggtg tcgacgcact
3501 tttggttgaa aacgtacagg gaaagacctt ttctagtgtc tctttgtttg
3551 tgagggaaag tgataagtca tcttattcta accctcattt gcgattggtc
3601 gctattacga ggcacagaaa gttactggtg ttaagggccg acccggaagt
3651 gtgggtgagt ttcatgtttg ctacccgtga ggaagagcaa accgacacac
3701 attgctatgg tgaagagcac agtcccgaca agacccaata aatattggcc
3751 tggagtggta gctatagggc ttgtctcttt gtttattttc ctttccgtct
3801 ctaatcaaaa gcattctact acctcaggag ataatataca taagtttgct
3851 aacggtggta cttatagaga cgggtccaag tgcattactt ataatagaaa
3901 ttcgccttta gcttataatg gaagttccag taataacaca ctcttctggt
3951 tgtgtttgct cggattgtca atggtctggg tcgccttctg tggctataaa
4001 agcatcacag gacaatgggg atgccaacat gacaagcggg aaagaaacta
4051 cctttttgag tgttttgact gataatattt tgctatttgt tatcgctgga
4101 gcgatgttgt tggtatttct atttgtgaat cgaagtgttg ttgatcccgt
4151 tgtgtattcc gaatttcatc aagatctgaa tggagtgagt ataaagttgg
4201 ctgcgggtgt gcctatcgat cctgcattag tggcagctgt acatcattgg
4251 caaaagttac ctttcggtga agatcctcgt gctaaggtct tagaaagtat
4301 actgcattgc ataaaatcaa gtgtagtttt gttaatagag tgtgtgtgct
4351 tactagcaat cgtgtgtcac taccattaat taaaaacaaa aatgattata
4401 ccgagattga tcacctcggg gcggcgcgag ccaaaaagcg cggttgtggg
4451 tttaatctaa aaaccctcta gtctcacgtc ctagctgtta tagagttaat
4501 tgcaaaaacc tctatatccg gctgtgatgg atgtgccgac aagatgtcgg
4551 aagtaccaag acacggtact tagtggctgg cgtagactgc tggtgcgcaa
4601 actcatagag tttgcgtagg tgcaaatccc ccgtcaatac ggagcgatat
4651 ccgtccca