Sequence of DPV Peanut clump virus
Peanut clump virus B segment RNA-2 coat protein, P38, P49, P14, and P17 genes, complete cds.
ACC No: AF447401
Dated: 2003-05-29 | Length: 4466 | CRC: 873772604
!!NA_SEQUENCE 1.0
ID AF447401 standard; genomic RNA; VRL; 4466 BP.
XX
AC AF447401;
XX
SV AF447401.1
XX
DT 02-JAN-2003 (Rel. 74, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 3)
XX
DE Peanut clump virus B segment RNA-2 coat protein, P38, P49, P14, and P17
DE genes, complete cds.
XX
KW .
XX
OS Peanut clump virus B
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Pecluvirus;
OC Peanut clump virus.
XX
RN [1]
RP 1-4466
RX MEDLINE; 22422427.
RX PUBMED; 12536297.
RA Naidu R.A., Sawyer S., Deom C.M.;
RT "Molecular diversity of RNA-2 genome segments in pecluviruses causing
RT peanut clump disease in West Africa and India";
RL Arch. Virol. 148(1):83-98(2003).
XX
RN [2]
RP 1-4466
RA Naidu R.A.;
RT ;
RL Submitted (14-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL Plant Pathology, University of Georgia, Miller Plant Sciences Building,
RL Athens, GA 30602, USA
XX
DR GOA; Q8B0X6.
DR GOA; Q8B0X8.
DR SPTREMBL; Q8B0X4; Q8B0X4.
DR SPTREMBL; Q8B0X5; Q8B0X5.
DR SPTREMBL; Q8B0X6; Q8B0X6.
DR SPTREMBL; Q8B0X7; Q8B0X7.
DR SPTREMBL; Q8B0X8; Q8B0X8.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4466
FT /db_xref="taxon:188884"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Peanut clump virus B"
FT /strain="B"
FT /segment="RNA-2"
FT CDS 393. .1070
FT /codon_start=1
FT /db_xref="GOA:Q8B0X8"
FT /db_xref="SPTREMBL:Q8B0X8"
FT /product="coat protein"
FT /protein_id="AAO15517.1"
FT /translation="MPNINLGALGGGHYPEEVFEQKIYDTGVDSDWWIEVEAYDKLLSG
FT LRSINFEVNSSRQQVAKLINNVDKDLPANPGVRFPGSRGTLGHSDYRPFRFRRIDATTR
FT GFFEDLVRISDQGKSRDTEINRPAAPTVGSNAQGTSLANNRGLSVIRDEQPLRDGAQNY
FT GHTFTTISLSNPVTYSRRKFESEFNLVWSASGGTHPTGTGTSVATGTGTTGTGRTGAGG
FT NAP"
FT CDS 1070. .2089
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8B0X7"
FT /product="P38"
FT /protein_id="AAO15518.1"
FT /translation="MGTFQVDDPSLFISPGREHSSSLGYVRVFRCLDYNSKSGIVFSDF
FT DLVCDIDVLLLNSVFDKYGNQLVKAPVTHDSLFITPCSCTISGLELRRLHDRLVKHHEI
FT VNNAGQVMLRLAEDHEVFDIVNGVSVMVSAYVRCADVFLWSDFGAPADATLCKLFARYR
FT LFSDDFVDDVQGELDVCRSKSSPNPVGNSQRELDTCRAELAKVKKDLSDARNNEDSLKK
FT RLKAEEVKVKDLTEKLSECERKGGVSAVEACETRWRGIVADMRRSHDEDTARHFKTITT
FT LTDTVVQITADFRRKNQLVKQYLWDKTKNSPSSSFQSQAYGDAFRFVRDNLDSDPIIT"
FT CDS 2251. .3546
FT /codon_start=1
FT /db_xref="GOA:Q8B0X6"
FT /db_xref="SPTREMBL:Q8B0X6"
FT /product="P49"
FT /protein_id="AAO15519.1"
FT /translation="MVKKNGKMSQAMWQKKFNADKEELRKKVEGMSVDAATDYLFDRID
FT VQRDAEKLLNERSSEGKFLKNTPVDGEIIGPSKIAANEVPVKLGSEKFIGEDPLKLIAR
FT AASEAGFSATGRVMKRFPADVFERSKFIGMYDRYLVNLREKACCSEERKKVQSKLIQLR
FT TLTPTVSFLAGTVTGVPGSGKSTLLKKIQRELPNSVCLLANKELKNDFAGVPAVFSVEE
FT MLLSAVPSHFNVMLVDEYTLMQSAEILLLQRKVEARIVVLFGDREQGNTNKLTSPEWLH
FT VPIIFSNERSFRFGRQTAEFCREQGFNLQGQGQEDSVIKSEYEGEGEETDINLCFTEET
FT RQDLLEVGVDALLVENVQGKTFSSVSLFVRGSDKSAYSNPHLRLVAVTRHRKLLVLRAD
FT PEVWVSFMFATREGEQADTHCYGEEHCPNETQ"
FT CDS 3512. .3880
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8B0X5"
FT /product="P14"
FT /protein_id="AAO15520.1"
FT /translation="MVKSTVPTRPNKYWPGVVAVGLVSLFIFLSLSNQKHSTTSGDNIH
FT KFSNGGTYRDGSKCITYNRNSPLAYNGSSSNNTLFWLCLLGLSVVWTAFCGYKSVTGQW
FT GGCQHDKKEGNYLFECFE"
FT CDS 3723. .4187
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8B0X4"
FT /product="P17"
FT /protein_id="AAO15521.1"
FT /translation="MEVPVITHSFGCVCSDCQWSGLPSVDTKASQDNGVGASTTRRRET
FT TFLSVLNDNIVLFVIAGAMLLLFLFLNRSVTDQVVYSEFHQDLNGVSIKLAAGVPIDPA
FT LVAAIHHWQKLPFGEDPRVGLLNSVLQCIKSGSSLLLLSLCLLVFVCHYR"
XX
SQ Sequence 4466 BP; 1163 A; 837 C; 1148 G; 1318 T; 0 other;
AF447401 Length: 4466 September 11, 2003 13:47 Type: N Check: 275 ..
1 gtattcggtt ctcttatagt gtagcgtgaa gcggagcacg actagagacc
51 ataccatccc ttgtatccaa accactcctc tacaccttag ggtgctgaaa
101 ggtgtccgac gacggtatag agagtaaaga gtttcgtcct tttggctcga
151 ctgggttcgt ccctgcctct ttgctttgct accattttcg cggattatct
201 ttttctccct gaggaggagg gtggaactac catcggttgg cggtgttctg
251 atctattgtg cgtgacgacg ttgaactacc gtacagttct cttcgtgaga
301 ctgagcttgc ctctgcctgt tggtaacttc agcattttcg ttgcccgcaa
351 gggttgatca ccagggctga cccttaccca aactactaag agatgcctaa
401 tatcaatttg ggagctcttg gtggtggtca ctatcctgag gaagtatttg
451 agcaaaaaat atacgatact ggtgtagact cagattggtg gatagaagtt
501 gaggcctatg ataagttgtt gagcggtctg cgttcgatca acttcgaagt
551 gaatagttcc cgacagcaag tggccaaatt aataaacaac gtggacaaag
601 atctaccagc gaatcctggg gttcgatttc ctggtagtcg cggaaccctc
651 ggacattctg attatagacc ttttaggttc aggcgtattg acgcgactac
701 tagaggtttc tttgaggacc tggttcgaat atcggatcag ggaaagtccc
751 gtgacacgga gattaacaga cctgctgcgc ctaccgttgg ctcaaacgct
801 caaggtacca gtttggccaa caatcgtggt ttgagtgtca taagagacga
851 acagcctttg agggacggtg cccagaacta cggtcacact tttacgacga
901 tttctttatc taatcctgtg acatatagcc ggaggaagtt cgagagtgag
951 tttaacttgg tctggtcggc ttctggtggc acccatccga caggtacagg
1001 cacgtcagtg gctactggaa ctggtactac tggtacgggt agaaccggtg
1051 ccggtggcaa cgctccttga tgggtacttt ccaggtagat gatccctctc
1101 tgtttatatc cccggggagg gagcatagtt cttctttggg atatgtacgt
1151 gtttttcgtt gtttagatta taacagtaag tctggtattg tctttagtga
1201 tttcgatttg gtgtgtgata tagatgtgtt gcttcttaac agtgtttttg
1251 acaagtatgg caatcaattg gtaaaagctc ccgtgactca cgactcttta
1301 ttcatcactc cttgctcatg tacgatctcc ggtctagaat tgcgaaggct
1351 acatgaccgt cttgtgaagc atcatgaaat tgttaataac gctggtcagg
1401 tcatgttgag gctagcagag gatcacgaag tgtttgatat cgttaacggt
1451 gtatccgtta tggtgagtgc ttatgttaga tgtgctgacg tttttctctg
1501 gtcagacttt ggagcgcccg ctgatgctac tttgtgcaaa ttattcgcta
1551 ggtaccgact gttttctgac gactttgtgg acgatgttca aggtgaactt
1601 gacgtttgtc gttccaaaag ctcgcccaat ccggttggga actctcagcg
1651 agaactagac acttgtagag cggagttggc caaagtaaag aaggacctga
1701 gtgatgcacg gaacaatgag gactccctga agaaaaggtt gaaagctgaa
1751 gaagttaaag ttaaagattt gacggagaag ttatctgagt gcgagagaaa
1801 agggggtgtt tccgctgtgg aagcatgtga gacacgatgg aggggtattg
1851 tggccgacat gcgacgttct catgacgagg atactgctag gcatttcaag
1901 actatcacca cgttaacaga tacagttgtt cagattactg ccgattttcg
1951 gcggaaaaat cagttggtga aacagtatct ttgggacaaa acgaagaaca
2001 gtccatcgtc gtcatttcag agtcaagctt acggtgacgc gtttagattt
2051 gttcgtgaca acttggattc tgaccctatc attacttgaa agggtatgag
2101 cccaatggag ttatcaattg atggtgattt ttgttacatc atgtttgttt
2151 tgtgtctttt acacattact gttttctagt tttgtgtgtt gtttttgtat
2201 ttcccttgtt gtggctgtga tcactcgttg tttaatttta aaagtgagcc
2251 atggttaaga aaaacggtaa gatgtctcaa gccatgtggc aaaagaagtt
2301 caacgcggat aaggaggagc ttcgtaaaaa ggtggaaggt atgagtgttg
2351 atgcggcgac cgattatctt tttgatagaa ttgatgtaca gagagacgct
2401 gaaaaacttc ttaatgaacg ctcatcagaa gggaagtttc taaaaaatac
2451 acctgttgat ggagaaataa ttggaccgtc aaaaatagct gctaatgaag
2501 taccggtgaa gctaggttcc gagaaattta tcggcgaaga tcctttaaag
2551 ctcatagcca gagcagcttc ggaggcaggt ttttctgcca ccggtagagt
2601 gatgaaacgt tttcctgcgg acgtttttga aaggtcaaaa ttcattggta
2651 tgtacgatag gtacctcgta aatttgagag aaaaggcgtg ctgcagtgag
2701 gagaggaaaa aggtgcaatc taagcttatt cagcttagga ctttaactcc
2751 tacagtttcg ttccttgctg gtactgtcac aggtgtgccc gggtcgggaa
2801 aaagtaccct attaaagaaa attcaaaggg aattaccgaa ctcggtttgt
2851 ttattagcca acaaagagct taagaatgat tttgccggtg taccggctgt
2901 tttttccgtt gaagagatgt tactaagtgc tgtaccatct catttcaatg
2951 tgatgttggt tgacgagtac acattgatgc aaagtgctga aattctgctt
3001 cttcaaagaa aggttgaagc tagaattgtt gtattatttg gagatagaga
3051 gcaaggtaac accaacaagc ttactagccc tgagtggttg cacgtcccaa
3101 taatctttag caacgagcga agctttaggt ttgggagaca aacagcagag
3151 ttctgccgag agcagggctt taatttgcaa ggacaaggtc aagaagacag
3201 tgtaattaag agcgaatatg agggcgaggg cgaagaaact gatataaatc
3251 tgtgcttcac ggaggaaact agacaagatc tattagaagt gggtgtcgac
3301 gcacttttgg ttgaaaacgt tcaaggaaaa actttctcta gtgtttcatt
3351 gtttgtgagg ggaagtgata agtcagctta ttccaaccct catttgcgac
3401 tagtcgctgt cactaggcat aggaagttac tggtgttgag ggccgaccca
3451 gaagtgtggg tgagtttcat gtttgccact cgtgaaggag agcaagccga
3501 cacacattgc tatggtgaag agcactgtcc caacgagacc caataaatat
3551 tggcctggag tagtggctgt agggcttgtt tcgttgttca tttttctttc
3601 tttatctaat caaaagcact ctactacatc gggggataac atacacaagt
3651 tctcgaacgg tggtacttac agagacggat ctaagtgtat cacttataat
3701 agaaattccc ctttagctta caatggaagt tccagtaata acacactctt
3751 ttggttgtgt ttgctcggat tgtcagtggt ctggactgcc ttctgtggat
3801 acaaaagcgt cacaggacaa tggggtgggt gccagcacga caagaaggag
3851 ggaaactacc tttttgagtg ttttgaatga taatattgtg ttgtttgtta
3901 ttgctggagc gatgttgttg ctgtttttat ttttaaatcg cagtgtgact
3951 gatcaagttg tgtactctga atttcatcag gatttaaacg gtgttagtat
4001 caagttagca gcaggagtac ctatagatcc tgcgttagtg gccgctatac
4051 atcactggca aaaactgcct tttggcgaag atcctcgcgt tggattgtta
4101 aatagcgtgt tgcaatgtat aaagtctggt tcgtctttat tgttgttatc
4151 tttgtgttta ttagtgtttg tgtgtcacta tcgttgaata aatacaaaaa
4201 tgattatacc gagagtgatc aactcggggc ggtgcgagcc atagagcacg
4251 gttgtgggtt taatcttaaa accctctagt ctcatgtcct agctgttata
4301 gagttaattg caaaaacctc tatatccggc tataatggat gtgccgacaa
4351 gttgtcggga gtgtcaagac acgacactta gtggctggcg tagactgctg
4401 gtgcgcaaac tcatagagtt tgcgtaggtg caaatccccc gtccatacgg
4451 agcgatatcc gtccca