Sequence of DPV Plum pox virus

Plum pox virus MYV-1 polyprotein gene, partial cds.

ACC No: AF450315

Dated: 2002-12-21 | Length: 778 | CRC: -1677996787

                !!NA_SEQUENCE 1.0
ID   AF450315   standard; genomic RNA; VRL; 778 BP.
XX
AC   AF450315;
XX
SV   AF450315.1
XX
DT   11-DEC-2001 (Rel. 70, Created)
DT   21-DEC-2002 (Rel. 74, Last updated, Version 2)
XX
DE   Plum pox virus MYV-1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-778
RA   Glasa M., Marie-Jeanne V., Labonne G., Subr Z., Kudela O., Quiot J.-B.;
RT   "A Natural Population of Recombinant Plum Pox Virus is Viable and
RT   Competitive under Field Conditions";
RL   Eur. J. Plant Pathol. 108(9):843-853(2002).
XX
RN   [2]
RP   1-778
RA   Glasa M., Marie-Jeanne V., Quiot J.-B.;
RT   ;
RL   Submitted (23-NOV-2001) to the EMBL/GenBank/DDBJ databases.
RL   Equipe Virus-Vecteurs, ENSA-INRA, 2, place Viala, Montpellier 34060, France
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .778
FT                   /country="Slovakia"
FT                   /db_xref="taxon:12211"
FT                   /mol_type="genomic RNA"
FT                   /organism="Plum pox virus"
FT                   /isolate="MYV-1"
FT                   /specific_host="Prunus domestica"
FT   CDS             <1. .>778
FT                   /codon_start=1
FT                   /db_xref="UniProtKB/TrEMBL:Q8V275"
FT                   /note="encodes partial P3, 6K1, and start of CI protein"
FT                   /product="polyprotein"
FT                   /protein_id="AAL39159.1"
FT                   /translation="EQAWKELSWSEKFSAILESQRWRRHIPKPFIPKDGADLGGRYDIS
FT                   VRSLLGNQYKRLRDVVRRKRDDVVCYTHQSMGKLFCKAIGISTSFLPSTLKMLDMLIVF
FT                   GLLLSIGATCNSMINEHKHLKQLAADREDKKRFKRLQVLYTRLSEKVGCTPTADEFLEY
FT                   VGGENPDLLKHAEDLIGDGQVVVHQSKRDSQANLERVVAFVALVMMLFDSERSDGVYKI
FT                   LNKLKGIMGSVDQAVHHQSLDDIEDILDEKRLTVDFV"
XX
SQ   Sequence 778 BP; 238 A; 149 C; 195 G; 196 T; 0 other;

AF450315  Length: 778  December 20, 2005 16:49  Type: N  Check: 7527  ..

       1  gagcaagctt ggaaagagtt aagctggtcg gaaaaattct ccgcaatctt
      51  ggaatcgcag cggtggcgaa gacatatacc aaaacctttc atcccgaaag
     101  acggcgcaga tttaggaggc aggtacgata tctccgttcg gtcattactt
     151  ggcaaccagt acaaacgcct gagagacgta gtccgccgga aaagggacga
     201  tgtggtttgc tatacacacc agtcgatggg gaagctattt tgcaaagcca
     251  tcggaatttc cacaagtttt cttccaagca ctcttaagat gcttgacatg
     301  ctcattgtgt tcggtctctt gctttcaata ggagccacat gtaactcaat
     351  gataaatgag cataaacatc ttaagcaact tgccgctgat cgggaagata
     401  agaaaaggtt caaaagattg caagtcttat acacgagatt atcagagaag
     451  gttggttgca caccaacagc agatgaattc ctggagtatg tgggaggtga
     501  aaaccctgat ttactgaaac atgcagagga tctaattggg gatggtcaag
     551  ttgttgttca tcaaagcaag agagattcac aagcaaattt ggaacgagtt
     601  gtagcatttg tagctcttgt tatgatgctg tttgactcag aacgaagtga
     651  cggcgtatac aagattctca ataaactcaa aggcatcatg gggagtgtcg
     701  accaggctgt tcatcatcag agcttggacg atatagaaga tatactggat
     751  gagaagaggc tcacagtcga ttttgtgc