Sequence of DPV Euprosterna elaeasa virus
Euprosterna elaeasa virus, complete genome.
ACC No: AF461742
Dated: 2010-02-08 | Length: 5698 | CRC: -844511572
ID AF461742; SV 1; linear; genomic RNA; STD; VRL; 5698 BP.
XX
AC AF461742;
XX
DT 22-FEB-2002 (Rel. 70, Created)
DT 08-FEB-2010 (Rel. 103, Last updated, Version 2)
XX
DE Euprosterna elaeasa virus, complete genome.
XX
KW .
XX
OS Euprosterna elaeasa virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Tetraviridae;
OC Betatetravirus.
XX
RN [1]
RP 1-5698
RX PUBMED; 19954807.
RA Zeddam J.L., Gordon K.H., Lauber C., Alves C.A., Luke B.T., Hanzlik T.N.,
RA Ward V.K., Gorbalenya A.E.;
RT "Euprosterna elaeasa virus genome sequence and evolution of the
RT Tetraviridae family: emergence of bipartite genomes and conservation of the
RT VPg signal with the dsRNA Birnaviridae family";
RL Virology 397(1):145-154(2010).
XX
RN [2]
RP 1-5698
RA Zeddam J.-L.A., Pringle F.M., Gordon K.H., Ward V.K., Luke B.T.,
RA Gorbalenya A.E., Hanzlik T.N.;
RT "Genome organization of Euprosterna elaeasa virus defines it as a member of
RT a new group of insect RNA viruses";
RL Unpublished.
XX
RN [3]
RP 1-5698
RA Zeddam J.-L.A., Gordon K.H., Hanzlik T.N.;
RT ;
RL Submitted (20-DEC-2001) to the EMBL/GenBank/DDBJ databases.
RL Insect Virology, IRD, Route de Montpellier, Saint-Christol-les-Ales 30380,
RL France
XX
FH Key Location/Qualifiers
FH
FT source 1. .5698
FT /organism="Euprosterna elaeasa virus"
FT /mol_type="genomic RNA"
FT /note="isolated from larvae of Euprosterna elaeasa, Dyar
FT (Lepidoptera: Limacodidae)- a major defoliating pest of
FT oil-palms in several Latin American countries"
FT /db_xref="taxon:186165"
FT CDS 95. .3868
FT /codon_start=1
FT /product="putative replicase"
FT /db_xref="UniProtKB/TrEMBL:Q8QYM6"
FT /protein_id="AAL78970.1"
FT /translation="MEASNPVIAPTRLSLEAMLEERASVVRQDLQSLRVRLEGAPRTLA
FT PQAPEKQGRDSAQAAAKSIVTELRDAVKEAQGLEHKSLDFLEQLGEYPVCGIIHGDHPI
FT HPSGTNNNKGKVSVQRQFTTSMNSVDALQVALRYEDVPLVRDIALKTTYTDGSLAGFVE
FT RLKLQTTRPCVQEKVSRRLLRELFPYDPQKLVDVSRELSDLVLEIKTNATASAGPPYWR
FT SKRDALPDMLDCVLPLLYQHIVDGDLATLKNKHPELFLAECKNKTDRYEVEKLGEKTRP
FT YFSHPFHLSALVSVLSQSFSKALKIMTEESTSYNAYGFSWTNGGAEDLVIWARGAGEVG
FT KEPPRIACYGDDTDIYYRQKGRLYRICPDFKQMDGSVDETTIKAVVDYVVHAHTSQYPL
FT AKGFWLEVGKLWVEMATSSPFLIDGTLVYRKKQKDGLMTGVVGTTLFDTVKSALAYKDW
FT ADQLLFGDLELLKEKKAIKFFKEKHGLVIKEGTWNPTAVTEDPGYDELWTEQKFLGLQI
FT KVVKHADTDEKVFVPTLPYSDWLSMWVTPRARLGHKESYTMRQRTLFDRARGLLVTGAA
FT FDKQARELMGSVINETPSEIVCMKVQEGGGRGAPPSYAFLTRDGNFEFPVSDGFPDLAW
FT TTRLYSRDQTGDMPRVFPDAVTLIAAYRKRLMDTRIAVKEGNVSYLMEVAVAETGLNME
FT MPAEAVVLPPKPPSIQKPREFTYAENVSTSTGSLVVKKVDKVPDSAGTLETIFQKFMES
FT VNKQIEELRAGQEKIERTIIMGAALPAEAIRKKMGNVDLRKTAEKAALFTHEEAGDLYL
FT STNPVLGHPDSFESGERAKEVHKVIGKHSTPERKAREKAEPVHDTGEFVKITGPAPGGV
FT PTQCEPGQTPWYSLCRSVSKAGYQVTTRTEPGLDHNGRPFVRAVVLQRNMRLKPQPWQE
FT WLVSTGRSLARAKELASDYALELVQRERYKQPLDATTSWAEDAELGDTIQLLDRGRHVF
FT SLIGERFERVNPGIGTKHQLTDRGDLMVWQPASGTYVVVAPPRKTRSGARSRTLASMVK
FT SVVRANVDLRVRTAGEPFFRDPVELSNLKKKINENKNEAFHESEDLRSEPEEYQRGPSS
FT SFHEDSPRAGDEHSDARQHDRVPHVQQLSTKLQGENRLEARDARRDRREPSLDKEGAEV
FT PQVPSGRPSYRPSLRDPNPRVQQLEEQVRSLQAQITTIAGVRPAPPRGGARKSGNMWRR
FT GGESRAPQRGPGAPGSGGGASQNRKPRGPKSW"
FT CDS 3336. .5606
FT /codon_start=1
FT /product="capsid protein precursor"
FT /db_xref="InterPro:IPR005313"
FT /db_xref="UniProtKB/TrEMBL:Q8QYM5"
FT /protein_id="AAL78971.1"
FT /translation="MKIRMRLSMNQKILEANLRNIKEGHPLAFMRTAQGREMSIAMLAN
FT MIVCPTCNNSLRNYKERTDWRRGTLDEIEENLAWIKRELRCLRCPPDDHLIDQACGIPT
FT PESSNSKSKSVHFKHRSRRLPESAQLPQGAGRGSLVTCGDVEENPGPPSVARGLQEVVA
FT GLAKTGSPEARNPGKQARRRRRRRTVKGTGNPNQPFAVTAGAALTRVPALRGTLAMSEP
FT ISPSSVGWLETNLDPCGEYKSTLDYGKVPDGAIPMSVCGQFRETFTIRHPGANPMVAPL
FT DGTMWTLGIIRTNLWRTPFLLIADMRNAEISDSSLDEVARSFNNYVGEIELASHPNWVE
FT TLQEGLYWSIQRWTALIGVPPPSDTGVSPYITDFRMTGSGFTVSSNTPSLINQGMVVVA
FT QFNPNTENKEIVPHSESGETPMGWSRVYSLSTSQIVTTYIQPGVGGAQNTFTVIANRGP
FT AVINSSVLPAVTQGYRFLNGDTYAVGDSLRYQFTERDSGGYTVYLQRSTDGTTFTNIGP
FT PSTTTAAPSGTSTASGVGFILEGDVLAGRVNMLTLPPFTQSDLMQQTPKTCVFQIKEGG
FT FYVRQDVWQPVYNMTPASRYAPVRFVSGAITLDSLNSSVGTIRDTADSNYGFALCHMTS
FT IPLACAPFIKAEMRFEAVPGRNSPWGLFATSTPPKDEVALTISRTVMDLEPFAMPLAYN
FT GWGLMFSKIINIVRKVPKVLRTASNVADVVANCVEDAQAGATRVYESVRGRRGAMRDMT
FT LQQ"
FT mat_peptide 3336. .3785
FT /product="small putative peptide"
FT /note="not encapsidated in the mature virion"
FT mat_peptide 3786. .5420
FT /product="large capsid protein"
FT mat_peptide 5421. .5603
FT /product="small capsid protein"
XX
SQ Sequence 5698 BP; 1385 A; 1357 C; 1616 G; 1340 T; 0 other;
af461742 Length: 5698 08-FEB-2010 Type: N Check: 6893 ..
1 aggtccacct ttcttgtata agaaaggtgg tgattcgctt acctttgacc
51 cagttcttta actcccacaa ccttagacaa cttgatgata aaatatggaa
101 gccagtaacc ccgttatagc gccaacccgc ttaagtttgg aagctatgtt
151 agaggaaaga gcatctgttg ttcgtcaaga tctacaaagt cttagggtga
201 gactggaggg ggcgcccagg acgttggccc cccaagcacc cgaaaaacag
251 gggagggaca gcgcccaagc cgccgccaag agcattgtga cggagcttcg
301 ggacgctgtc aaagaagcgc aaggtctgga gcataagagc ctagactttt
351 tggaacaact gggtgagtat cccgtgtgtg gtattataca cggggaccat
401 cctatccacc cctccggcac taacaacaat aaagggaaag ttagcgtcca
451 gagacagttc acaacaagta tgaacagtgt ggacgctctc caggtggccc
501 tcaggtatga agacgttcct ttggtgagag atatcgcctt aaaaacgaca
551 tacactgatg gttcccttgc cggctttgtg gagcgcttaa agctgcagac
601 cacgaggccg tgtgtgcagg agaaggttag ccggcgtctg ctccgggagc
651 tgtttccgta tgaccctcag aaactggtag atgtttcgcg ggagctgtcg
701 gatttagtcc tggaaattaa aacgaatgcg actgcatcgg ctgggccccc
751 atattggagg tccaagcgag acgcccttcc ggatatgttg gattgtgtgt
801 tgccgctgtt gtatcaacac attgtggatg gtgatctcgc cactttaaag
851 aataaacacc cggagttgtt tttggctgag tgtaagaaca aaacggaccg
901 ctatgaggtc gaaaaactgg gggagaagac aaggccctat ttctcccacc
951 cgtttcatct ctccgctttg gtttctgtct tgtcccagag tttttcaaaa
1001 gcgctgaaga taatgacgga ggagagcacg tcttataacg cctatggttt
1051 tagttggacc aatggaggag cagaagatct cgttatatgg gcgcgaggag
1101 cgggggaagt tggaaaagaa cccccgagaa tcgcctgtta tggtgatgat
1151 acagatatat attatcgcca gaagggccgt ctgtaccgca tttgcccgga
1201 ctttaagcaa atggatggta gtgttgatga gaccactata aaagccgtgg
1251 tcgattacgt tgtacatgcc cacactagtc agtaccctct ggcgaagggg
1301 ttctggcttg aagttggaaa gttgtgggtt gagatggcca cgtcttcgcc
1351 ttttctgata gacggaactt tggtctacag gaaaaagcag aaagacgggc
1401 tgatgacggg tgtcgttggg acgacgctat tcgacacggt gaaaagtgcc
1451 ctagcctata aggactgggc cgatcagctc ctcttcgggg atcttgagtt
1501 gttgaaggag aaaaaggcga tcaagttctt caaggagaag cacggcttgg
1551 ttatcaaaga gggcacctgg aatccaactg ctgtgacaga ggatccgggt
1601 tatgatgagc tgtggacaga acagaagttt ttaggtctgc agatcaaagt
1651 agtaaaacat gcagatacag acgaaaaggt ctttgtgccc accctgccgt
1701 actctgactg gctctctatg tgggtgaccc ctcgtgctcg tttggggcac
1751 aaggagtcgt atactatgcg ccagagaacg ttgtttgatc gcgcccgcgg
1801 gcttttagtt acaggtgctg cttttgacaa gcaggcccgc gaattgatgg
1851 gttcggttat aaatgaaaca ccctctgaaa tagtgtgcat gaaggttcaa
1901 gaggggggag gccgtggggc ccccccttcc tatgccttcc tgacacgcga
1951 tgggaacttt gagttccctg tttcagacgg ttttcctgat ttagcgtgga
2001 cgacacgctt gtatagccgt gatcaaaccg gtgacatgcc ccgtgtcttc
2051 cctgatgcgg taaccctgat agccgcgtac cgtaaacgtt tgatggatac
2101 gcgtatagct gtgaaagagg gcaacgtttc ctatttgatg gaagttgcag
2151 tggcggagac cggcctcaat atggagatgc cggcggaggc tgttgtgttg
2201 cccccgaagc ccccttccat tcaaaagccg cgggagttta cctacgcgga
2251 aaatgtctca acgtctacgg gctctttggt ggtcaagaag gtagataaag
2301 tgccggactc agccggcacc ttggagacca tcttccagaa gtttatggag
2351 tctgttaata aacagataga agagctccgt gccgggcagg agaagattga
2401 gcgcaccatt attatgggtg cggctctccc tgctgaggcg attaggaaga
2451 aaatgggcaa cgttgacctg cgaaagacgg ctgaaaaagc cgccttattc
2501 acgcacgagg aagctggtga cctgtatttg tcaaccaacc ctgtgctcgg
2551 tcaccctgat tcttttgagt ccggggaaag agctaaggag gtgcataagg
2601 tcattgggaa gcatagcaca ccagagcgaa aagccagaga gaaggcggag
2651 cctgttcatg acacaggaga gtttgtgaag ataacgggcc ctgcccctgg
2701 aggcgtacct acccagtgtg aacccggtca gacaccgtgg tattccctgt
2751 gtagaagtgt gagcaaagca gggtatcaag tgacaacgag gacggagccc
2801 ggtttggacc ataacgggcg gccgtttgtg agagctgtgg ttttgcaaag
2851 gaatatgcgc cttaaacccc agccgtggca ggagtggctg gtgtcgacgg
2901 gccggtctct tgctagggcg aaggagttag cgagtgatta cgctctggag
2951 cttgttcaaa gagagcgtta taaacagcct ttggatgcca cgactagctg
3001 ggcagaagat gccgagttag gtgacactat tcagctcctc gatcggggtc
3051 gacatgtgtt ctcccttatt ggggagaggt ttgagcgggt taaccccgga
3101 ataggaacta aacaccagct aacagacagg ggggacttga tggtttggca
3151 acctgcaagt ggcacttacg ttgttgtggc ccccccccgc aaaactagaa
3201 gcggggcaag atctcgcact cttgcctcga tggtgaagtc ggtagtgcga
3251 gctaatgtgg acctgcgggt gaggaccgca ggcgaaccct tctttaggga
3301 cccagttgaa ctttccaatt tgaaaaagaa aattaatgaa aataagaatg
3351 aggctttcca tgaatcagaa gatcttagaa gcgaacctga ggaatatcaa
3401 agagggccat cctctagctt tcatgaggac agcccaaggg cgggagatga
3451 gcatagcgat gctcgccaac atgatcgtgt gccccacgtg caacaactct
3501 ctacgaaact acaaggagag aacagattgg aggcgaggga cgctcgacga
3551 gatagaagag aacctagctt ggataaagag ggagctgagg tgcctcaggt
3601 gccctccgga cgaccatctt atagaccaag cttgcgggat cccaaccccc
3651 gagtccagca actcgaagag caagtccgtt cacttcaagc acagatcacg
3701 acgattgccg gagtccgccc agctccccca aggggcgggg cgcggaagtc
3751 tggtaacatg tggcgacgtg gaggagaatc cagggccccc cagcgtggcc
3801 cgggggctcc aggaagtggt ggcggggcta gccaaaacag gaagccccga
3851 ggcccgaaat cctggtaagc aagcgaggag gcggcgtcgg cgtagaaccg
3901 ttaaaggcac gggaaatccc aatcagcctt ttgcggttac cgctggcgcc
3951 gctctaacgc gggtcccggc gttgcgtgga actctcgcga tgtcggaacc
4001 catctcacct tcgtcggtag gttggttgga gaccaacctt gacccatgtg
4051 gtgagtataa gtcgacccta gactatggta aggtgcctga tggtgccatc
4101 cctatgtcgg tttgtggtca gtttagagag actttcacga tccgacatcc
4151 tggggccaac ccaatggtgg cccctttgga tggcaccatg tggacccttg
4201 gtataatccg gactaattta tggaggactc cgtttctctt gattgcagac
4251 atgaggaatg ctgaaatatc cgattcatct ctagatgagg tagctcggtc
4301 tttcaacaat tatgtcggcg agattgaatt agcgtctcac ccgaattggg
4351 ttgagacctt gcaggagggc ctgtattggt ccatccagcg gtggacggct
4401 ttaataggcg tcccacctcc cagtgatacg ggggtttctc cctatatcac
4451 tgatttccgg atgacaggtt cgggatttac tgtgtcttcc aacaccccat
4501 ctcttattaa tcaagggatg gtggtggtgg cacagtttaa cccgaacact
4551 gagaacaagg agatagtacc ccattctgag tctggggaga ctccgatggg
4601 gtggtctcgg gtttattccc tatcaacgtc acagatagtt acgacttata
4651 ttcaaccagg ggtgggaggt gcccagaata ccttcacagt cattgccaat
4701 agagggcctg ctgtaattaa tagctcggtt ctccctgctg tcactcaagg
4751 ttaccgtttt ttaaatggag acacgtatgc agttggggac tccctccgat
4801 atcagtttac ggagcgagac tcaggcgggt atacagtcta tctgcaaagg
4851 tcaactgatg gtacgacctt tacaaatatt ggcccgccgt cgacgacaac
4901 tgctgcccca tctggcactt caacggcttc tggggtgggt ttcatcctag
4951 aaggtgatgt tttggccgga cgtgtgaata tgttaacctt accgcccttt
5001 acccagtctg atctgatgca acagacccca aagacgtgtg tgttccagat
5051 caaagagggt ggtttttatg tgcgccagga tgtttggcaa cccgtctata
5101 atatgacccc agccagccgt tatgcccccg ttcgatttgt gtcgggagca
5151 ataactttag atagcctgaa ttcttctgta ggaactatcc gcgatacagc
5201 agactctaac tatgggtttg cgctgtgtca catgacctcg ataccgttgg
5251 cgtgcgcccc ttttattaaa gctgagatgc gctttgaagc ggtgccaggt
5301 cggaactctc cctgggggct ttttgccacc tccactcccc ccaaggatga
5351 agttgcgttg accatatcac gcacggtcat ggacttagaa ccttttgcca
5401 tgccccttgc ctataatggg tggggcttga tgttctcaaa aatcatcaat
5451 atagtacgca aggttccgaa ggtcctccgc acagcgagca acgttgctga
5501 tgttgttgct aactgcgtgg aggacgccca agctggtgcc acccgagttt
5551 atgagagtgt gcgggggcgc cgaggggcta tgcgagatat gaccctacag
5601 cagtgagcgg agacaaatta agggccttct gccccgcgtg aaccgctcct
5651 tttattttct ttttataaac cataatcaat aaatcctttt tccacgcg