Sequence of DPV Potato virus S

Potato virus S strain Andean coat protein mRNA, complete cds.

ACC No: AF493951

Dated: 2003-07-31 | Length: 949 | CRC: -643599876

                !!NA_SEQUENCE 1.0
ID   AF493951   standard; RNA; VRL; 949 BP.
XX
AC   AF493951;
XX
SV   AF493951.1
XX
DT   02-APR-2003 (Rel. 75, Created)
DT   31-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Potato virus S strain Andean coat protein mRNA, complete cds.
XX
KW   .
XX
OS   Potato virus S
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Carlavirus.
XX
RN   [1]
RP   1-949
RX   MEDLINE; 22497660.
RX   PUBMED; 12609685.
RA   Boonham N., Walsh K., Smith P., Madagan K., Graham I., Barker I.;
RT   "Detection of potato viruses using microarray technology: towards a generic
RT   method for plant viral disease diagnosis";
RL   J. Virol. Methods 108(2):181-187(2003).
XX
RN   [2]
RP   1-949
RA   Boonham N., Walsh K.;
RT   ;
RL   Submitted (21-MAR-2002) to the EMBL/GenBank/DDBJ databases.
RL   Plant Health, CSL, Sand Hutton, York YO41 1LZ, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .949
FT                   /db_xref="taxon:12169"
FT                   /mol_type="mRNA"
FT                   /organism="Potato virus S"
FT                   /strain="Andean"
FT   CDS             24. .908
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AAO85502.1"
FT                   /translation="MPPKPDPSSSGEAPQAMPYAPPPRAAEEHKAGPSLGPGPNEEAML
FT                   EQRLVRLIELMAAKRHNSTLSNISFEIGRPALEPTPEMRRNPENPYSRFSIDELFKMEI
FT                   RSVSNNMANTEQMAQITADIAGLGVPTEHVAGVILKVVIMCASVSSSVYLDPAGTVEFP
FT                   SGAVPLDSIIAIMKNRAGLRKVCRLYAPVVWNYMLVQNRPPSDWQAMGFQWNARFAAFD
FT                   TFDYVTNGAAIQPVEGLIRRPTPEETIAHNAHKSMALDKSNRNERLANTNVEYTGGMLG
FT                   AEIVRNHRNAINQ"
XX
SQ   Sequence 949 BP; 256 A; 223 C; 259 G; 211 T; 0 other;

 AF493951  Length: 949  August 12, 2003 09:33  Type: N  Check: 2950  ..

       1  gaatatacag tctcacagca agaatgccgc ctaaaccaga tccatctagt
      51  tcaggggaag caccacaagc aatgccatat gcgccaccgc cgagagcagc
     101  ggaagaacac aaggctggac catctctggg tccaggacca aatgaagaag
     151  caatgttaga gcaaagactc gtcagattga ttgagctcat ggccgcaaag
     201  aggcataact caacgttgag caacatctcc tttgagatag gtaggcccgc
     251  tcttgagcct acccctgaga tgaggaggaa tccggaaaac ccctactcac
     301  gattctcgat cgatgagctg ttcaaaatgg aaatccggtc ggtgtccaac
     351  aacatggcga atactgagca gatggcacag atcaccgcgg atatcgctgg
     401  gctcggtgtt cccactgagc atgttgcagg agtcatactg aaggtggtga
     451  tcatgtgcgc gagtgtgagt agctctgttt acctagaccc tgctggaact
     501  gttgagttcc cttccggggc ggtccccttg gattcaataa ttgccatcat
     551  gaaaaatcga gcagggttga ggaaggtgtg taggttgtat gctccagttg
     601  tttggaacta catgcttgtt cagaacaggc ccccgtcaga ctggcaagcc
     651  atggggtttc aatggaatgc gcgcttcgcc gcttttgaca cttttgacta
     701  tgtgactaac ggtgctgcaa tccagcccgt agaagggctc attcgtaggc
     751  caactcctga ggagacgata gctcataatg cgcacaagag catggcgctc
     801  gataagtcaa acagaaatga aaggctggcc aacactaatg ttgagtacac
     851  tgggggcatg cttggcgctg agattgtgcg caaccatcgg aatgcaataa
     901  accaatgaag gcggagcgtt tagaaatgtt actgttgtgt gtttacagg