Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate VNW-49 coat protein (cp) gene, partial cds.

ACC No: AF506842

Dated: 2002-09-24 | Length: 846 | CRC: 487927325

                
ID   AF506842   standard; genomic RNA; VRL; 846 BP.
XX
AC   AF506842;
XX
SV   AF506842.1
XX
DT   24-SEP-2002 (Rel. 73, Created)
DT   24-SEP-2002 (Rel. 73, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate VNW-49 coat protein (cp) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-846
RX   PUBMED; 12237441.
RA   Bateson M.F., Lines R.E., Revill P., Chaleeprom W., Ha C.V., Gibbs A.J.,
RA   Dale J.L.;
RT   "On the evolution and molecular epidemiology of the potyvirus Papaya
RT   ringspot virus";
RL   J. Gen. Virol. 83(Pt 10):2575-2585(2002).
XX
RN   [2]
RP   1-846
RA   Bateson M.F., Lines R.E., Revill P., Chaleeprom W., Ha C.V., Gibbs A.J.,
RA   Dale J.L.;
RT   ;
RL   Submitted (29-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   School of Life Sciences, Queensland University of Technology, 2 George St,
RL   Brisbane, Queensland 4000, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .846
FT                   /country="Viet Nam"
FT                   /db_xref="taxon:12205"
FT                   /mol_type="genomic RNA"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="VNW-49"
FT                   /specific_host="Cucurbita sp."
FT   CDS             <1. .846
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8BD95"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q8BD95"
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="AAN17189.1"
FT                   /translation="GLNEKLKEKEKQKEKEKEKEKQKDKDNDGASDGNDVSTSTKTGER
FT                   DRDVNAGTSGTFTVPRIKSFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRATQSQ
FT                   FEKWYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGGTQVDYPIKPL
FT                   IEHATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNS
FT                   KTPDRAREAHMQMKAAALRNTSRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMRN
FT                   "
XX
SQ   Sequence 846 BP; 303 A; 145 C; 203 G; 195 T; 0 other;

af506842 Length: 846  24-SEP-2002  Type: N  Check: 2610  ..

       1  ggcctgaatg agaagctcaa agagaaagaa aaacagaaag aaaaagaaaa
      51  agaaaaagaa aaacagaaag ataaagacaa tgatggagct agtgacggaa
     101  acgatgtgtc aactagcaca aaaactggag agagggatag agatgtcaat
     151  gctggaacta gtggaacttt cactgttcca aggataaagt catttactga
     201  taagatgatt ttaccaagaa ttaagggaaa aactgtcctt aatttaaatc
     251  atcttctcca gtataatccg caacaaattg acatctcaaa cactcgtgcc
     301  actcaatccc aatttgaaaa gtggtatgag ggagtgagga atgattatgg
     351  acttaatgat aatgaaatgc aagtgatgtt gaatggtttg atggtttggt
     401  gtatcgaaaa tggtacatct ccagacatat ctggtgtctg ggtaatgatg
     451  gatgggggaa cccaagttga ttatcccatt aaacctttga ttgaacatgc
     501  aactccttca tttaggcaaa tcatggctca cttcagcaac gcggcagagg
     551  catacatcgc aaagagaaac gcaactgaga ggtacatgcc gcggtatgga
     601  atcaagagga atttgactga cattagtctc gctagatatg ctttcgattt
     651  ctatgaggtg aattcaaaaa cacctgatag ggctcgtgaa gctcatatgc
     701  agatgaaggc tgcagcacta cgcaacacta gtcgcagaat gtttggaatg
     751  gacggcagtg tcagtaacaa ggaagaaaac acggagagac acacagtgga
     801  agatgtcaac agagacatgc actctctcct gggtatgcgc aattga