Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate VNP-07 coat protein (cp) gene, partial cds.

ACC No: AF506884

Dated: 2002-09-24 | Length: 837 | CRC: -1138870199

                
ID   AF506884   standard; genomic RNA; VRL; 837 BP.
XX
AC   AF506884;
XX
SV   AF506884.1
XX
DT   24-SEP-2002 (Rel. 73, Created)
DT   24-SEP-2002 (Rel. 73, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate VNP-07 coat protein (cp) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-837
RX   PUBMED; 12237441.
RA   Bateson M.F., Lines R.E., Revill P., Chaleeprom W., Ha C.V., Gibbs A.J.,
RA   Dale J.L.;
RT   "On the evolution and molecular epidemiology of the potyvirus Papaya
RT   ringspot virus";
RL   J. Gen. Virol. 83(Pt 10):2575-2585(2002).
XX
RN   [2]
RP   1-837
RA   Bateson M.F., Lines R.E., Revill P., Chaleeprom W., Ha C.V., Gibbs A.J.,
RA   Dale J.L.;
RT   ;
RL   Submitted (29-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   School of Life Sciences, Queensland University of Technology, 2 George St,
RL   Brisbane, Queensland 4000, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .837
FT                   /country="Viet Nam"
FT                   /db_xref="taxon:12205"
FT                   /mol_type="genomic RNA"
FT                   /note="biotype: P"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="VNP-07"
FT                   /specific_host="Carica papaya"
FT   CDS             <1. .837
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8BD53"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q8BD53"
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="AAN17231.1"
FT                   /translation="GLNEKPKEKEKQKEEKDKQKDKNNEGASDGNDVSTSTKTGERDRD
FT                   VNAGTSGTFTVPRIKSFTDKMVLPRIKGKTVLNLNHLLQYNPQQIDISNTRATQTQFEK
FT                   WYEGVRNDYGLDDNEMQVMLNGLMVWCIENGTSPDISGVWVMMDGETQVEYPIKPLIEH
FT                   ATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNSKTP
FT                   DRAREAHMQMKAAALRNTGRRMFGMDGSVSNKEENTERHTVEDVNRDMHSLLGMRN"
XX
SQ   Sequence 837 BP; 297 A; 136 C; 200 G; 204 T; 0 other;

af506884 Length: 837  24-SEP-2002  Type: N  Check: 7203  ..

       1  ggtttgaatg agaagcctaa agagaaagaa aaacaaaaag aagaaaaaga
      51  taaacaaaaa gataagaata atgaaggtgc tagtgacgga aacgatgtgt
     101  caactagtac aaaaactgga gagagagata gagatgtcaa tgctggaact
     151  agtggaactt tcactgttcc gagaataaaa tcatttactg acaagatggt
     201  tttaccaaga attaaaggaa aaactgtcct taatttgaat catcttcttc
     251  agtataatcc gcaacaaatt gatatctcaa acactcgtgc cactcaaact
     301  caattcgaaa agtggtatga gggagtgagg aatgattatg gtcttgacga
     351  taatgaaatg caagtgatgt taaatggttt gatggtttgg tgtatcgaaa
     401  atggtacatc tccagacatt tctggtgttt gggtaatgat ggatggggaa
     451  acacaagtcg aatatcccat caagccttta attgaacatg caactccttc
     501  gtttaggcaa attatggctc acttcagtaa cgcggcagag gcatacatcg
     551  cgaagaggaa tgcaactgaa aggtacatgc cgcggtatgg aatcaagagg
     601  aatttgactg atattagtct cgctagatat gctttcgatt tctatgaggt
     651  gaattcaaaa acacctgata gagctcgtga agctcatatg cagatgaaag
     701  ctgcagcact gcgtaatact ggtcgcagaa tgtttggaat ggacggcagt
     751  gtcagtaaca aggaagaaaa cacggagaga cacacagtgg aagatgtcaa
     801  cagagacatg cactctctcc tgggtatgcg caactga