Sequence of DPV Papaya ringspot virus

Papaya ringspot virus isolate THU-10 coat protein (cp) gene, partial cds.

ACC No: AF506896

Dated: 2002-09-24 | Length: 834 | CRC: 1943942412

                
ID   AF506896   standard; genomic RNA; VRL; 834 BP.
XX
AC   AF506896;
XX
SV   AF506896.1
XX
DT   24-SEP-2002 (Rel. 73, Created)
DT   24-SEP-2002 (Rel. 73, Last updated, Version 1)
XX
DE   Papaya ringspot virus isolate THU-10 coat protein (cp) gene, partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-834
RX   PUBMED; 12237441.
RA   Bateson M.F., Lines R.E., Revill P., Chaleeprom W., Ha C.V., Gibbs A.J.,
RA   Dale J.L.;
RT   "On the evolution and molecular epidemiology of the potyvirus Papaya
RT   ringspot virus";
RL   J. Gen. Virol. 83(Pt 10):2575-2585(2002).
XX
RN   [2]
RP   1-834
RA   Bateson M.F., Lines R.E., Revill P., Chaleeprom W., Ha C.V., Gibbs A.J.,
RA   Dale J.L.;
RT   ;
RL   Submitted (29-APR-2002) to the EMBL/GenBank/DDBJ databases.
RL   School of Life Sciences, Queensland University of Technology, 2 George St,
RL   Brisbane, Queensland 4000, Australia
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .834
FT                   /country="Thailand: Nakhon Pathom"
FT                   /db_xref="taxon:12205"
FT                   /mol_type="genomic RNA"
FT                   /organism="Papaya ringspot virus"
FT                   /isolate="THU-10"
FT                   /specific_host="cucumber"
FT   CDS             <1. .>834
FT                   /codon_start=1
FT                   /db_xref="GOA:Q8BD41"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q8BD41"
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /protein_id="AAN17243.1"
FT                   /translation="GLNDKLKDKEKQKEEKDKQRGKENNEASDGNDVSTSTKTGERDRD
FT                   VNAGTSGTFTVPRIKLFTDKMILPRIKGKTVLNLNHLLQYNPQQIDISNTRATQSQFEK
FT                   WYEGVRNDYGLNDNEMQVMLNGLMVWCIENGTSPDISGIWVMMDGETQVDYPIKPLIEH
FT                   ATPSFRQIMAHFSNAAEAYIAKRNATERYMPRYGIKRNLTDISLARYAFDFYEVNSKTP
FT                   DRAREAHMQMKAAALRNTSRRMFGMDGSVINKEENTERHTVEDVNRDMHSLLGMRN"
XX
SQ   Sequence 834 BP; 292 A; 150 C; 197 G; 195 T; 0 other;

af506896 Length: 834  24-SEP-2002  Type: N  Check: 4482  ..

       1  ggtcttaatg ataagctcaa agataaagaa aaacagaaag aagaaaaaga
      51  taaacaaaga ggtaaagaaa ataatgaagc tagtgacgga aacgatgtgt
     101  caactagcac aaaaactgga gagagagata gagatgtcaa tgccggaact
     151  agtggtactt tcactgttcc gagaataaaa ttatttaccg acaagatgat
     201  tttacctaga attaagggaa aaactgtcct taatttaaat catcttcttc
     251  agtataatcc gcaacaaata gacatctcaa acactcgtgc cactcaatct
     301  caattcgaaa agtggtatga gggagtgagg aatgattacg gtcttaatga
     351  taacgaaatg caagtgatgt taaatggttt gatggtttgg tgcatcgaaa
     401  atggaacatc cccagacata tctggtatct gggtgatgat ggatggggaa
     451  actcaagtcg attatcccat caagcctttg atcgaacatg caactccttc
     501  gttcaggcaa atcatggctc acttcagtaa cgcggcagag gcatacatcg
     551  caaagaggaa tgctactgag aggtacatgc cgcggtatgg aatcaagagg
     601  aatttgactg acattagtct cgctagatat gctttcgact tctatgaggt
     651  gaactcaaag acacctgata gggctcgtga agctcatatg cagatgaagg
     701  ctgcagcgct gcgcaacact agtcgcagaa tgtttggaat ggacggcagt
     751  gtcattaaca aggaagaaaa cacggagaga cacacagtgg aagatgttaa
     801  cagagacatg cactctctcc taggtatgcg caat