Sequence of DPV Squash leaf curl China virus
Squash leaf curl China virus - [K] segment DNA-A, complete sequence.
ACC No: AF509741
Dated: 2004-04-02 | Length: 2736 | CRC: 542738294
!!NA_SEQUENCE 1.0
ID AF509741 standard; circular genomic DNA; VRL; 2736 BP.
XX
AC AF509741;
XX
SV AF509741.1
XX
DT 03-JUN-2003 (Rel. 76, Created)
DT 02-APR-2004 (Rel. 79, Last updated, Version 4)
XX
DE Squash leaf curl China virus - [K] segment DNA-A, complete sequence.
XX
KW .
XX
OS Squash leaf curl China virus - [K]
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC Squash leaf curl virus-China.
XX
RN [1]
RP 1-2736
RX MEDLINE; 22777210.
RX PUBMED; 12898329.
RA Revill P.A., Ha C.V., Porchun S.C., Vu M.T., Dale J.L.;
RT "The complete nucleotide sequence of two distinct geminiviruses infecting
RT cucurbits in Vietnam";
RL Arch. Virol. 148(8):1523-1541(2003).
XX
RN [2]
RP 1-2736
RA Revill P.A., Ha C.V., Porchun S.C., Vu M.T., Dale J.L.;
RT ;
RL Submitted (06-MAY-2002) to the EMBL/GenBank/DDBJ databases.
RL School of Life Sciences, Queensland University of Technology, Gardens
RL Point, Brisbane, Qld 4001, Australia
XX
DR TrEMBL; Q7T491; Q7T491.
DR TrEMBL; Q7T492; Q7T492.
DR TrEMBL; Q7T493; Q7T493.
DR TrEMBL; Q7T494; Q7T494.
DR TrEMBL; Q7T495; Q7T495.
DR TrEMBL; Q7T496; Q7T496.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2736
FT /country="Viet Nam"
FT /db_xref="taxon:269276"
FT /mol_type="genomic DNA"
FT /organism="Squash leaf curl China virus - [K]"
FT /isolate="K"
FT /segment="DNA-A"
FT gene 13. .465
FT /gene="AV2"
FT CDS 13. .465
FT /codon_start=1
FT /db_xref="TrEMBL:Q7T496"
FT /gene="AV2"
FT /product="precoat protein"
FT /protein_id="AAP47122.1"
FT /translation="MAARFFYVGPRPMKFTLHGLIIMLGPLNRLPLQVLIHNMWDPLMH
FT EFPESVHGLRCMLAVKYLQEVEKTYSPDTVGYDLVRDLILVLRAKNYVEATSRYYHFNS
FT RVEGTPTSQLRQPICFPCSCPHCPRHKGKGLDKQADEQKTKDVQDV"
FT gene 287. .1057
FT /gene="AV1"
FT CDS 287. .1057
FT /codon_start=1
FT /db_xref="TrEMBL:Q7T495"
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AAP47123.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAVVPIARVTKGKAWT
FT NRPMNRKPKMYRMYRSPDVPRGCEGPCKVQSFESRHDVSHIGKVMCISDVTRGTGLTHR
FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFFLVRDRRPTGTPQDFGEVFNMFDNEP
FT STATVKNMHRDRYQVLRKWHATVTGGTYASREQALVRKFVRVNNYVVYNQQEAGKYENH
FT TENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(317. .835)
FT /gene="AC4"
FT CDS complement(317. .835)
FT /codon_start=1
FT /db_xref="TrEMBL:Q7T491"
FT /gene="AC4"
FT /product="unknown"
FT /protein_id="AAP47127.1"
FT /translation="MPFAQHLISITMHILHRCSARFIVKHIKNLPKILWSSCRTTVSNK
FT KKYDAISVIFSLDIFVHPYLSKNINRFHTKSLPNAMCESGSSCNIADTHHLSNMRDIVP
FT RFKRLNFTRTFTAPWHVGTSIHPVHLWFSVHRPVCPGLSLCDAGNGDNCTGNIWAVEVE
FT TSAYLRRGS"
FT gene complement(1054. .1464)
FT /gene="AC3"
FT CDS complement(1054. .1464)
FT /codon_start=1
FT /db_xref="TrEMBL:Q7T492"
FT /gene="AC3"
FT /product="replication enhancer"
FT /protein_id="AAP47126.1"
FT /translation="MITDSRTGEYITVDRSESGVYIWEVPNPLYFKIIKHDIRPCLEEH
FT DIIKVQVVFNHNLRKALRLHKCAITFQIWTGLQPPTGIFLRVFKTQVLKYLDMLGVIGI
FT YNVIRAVYHVLDNVLEKTIDVWTTYDVKLNIY"
FT gene complement(1199. .1603)
FT /gene="AC2"
FT CDS complement(1199. .1603)
FT /codon_start=1
FT /db_xref="TrEMBL:Q7T493"
FT /gene="AC2"
FT /product="transcriptional activator"
FT /protein_id="AAP47125.1"
FT /translation="MQSSSPLKNHSIPVAKESQPQKKKKNIRRRRIDLPCGCSYYMSIN
FT CHDHGFTHRGVHHCGSFREWRVYLGGSKSPLFQNNKTRHQTLSRGTRHNQGAGSVQPQP
FT AESTAASQMCDNFPDLDGFTTADWDFLESL"
FT gene complement(1678. .2592)
FT /gene="AC1"
FT CDS complement(1678. .2592)
FT /codon_start=1
FT /db_xref="TrEMBL:Q7T494"
FT /gene="AC1"
FT /product="replication initiation protein"
FT /protein_id="AAP47124.1"
FT /translation="MAPPRPFKISAKNYFLTYPKCSLTKEEALSQLKTLETPTSKKFIK
FT ICRESHEDGSPHIHVLIQFEGKFQCKNNRFFDLVSPSRSAHFHPNIQGAKSASDVKKYI
FT DKDGDVLEWGVFQIDGRSARGGQETANDAYARALNTGNKEDALKVLKELAPKDYVLQFH
FT NMNSNLDRIFPPPAEVYVSPFSVSSFDRVPQELVDWVSKNVGCCAARPDRPIGIVLEGD
FT SRTGKTAWARSLGPHNYLCGHLDLSPRVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPVMIKGGNSHHLPLQ"
XX
SQ Sequence 2736 BP; 741 A; 590 C; 594 G; 811 T; 0 other;
AF509741 Length: 2736 April 20, 2004 09:34 Type: N Check: 4100 ..
1 taatattacc gaatggccgc gcgatttttt tatgtgggcc ctcgaccaat
51 gaaattcacg ctacatggcc taattattat gttgggacca ttaaatagac
101 ttccgctcca agttttgatc cacaacatgt gggatccact tatgcacgaa
151 ttccctgaaa gcgttcatgg tctaaggtgc atgctagcgg tgaaatatct
201 tcaggaagtg gaaaagacat attctccgga cacagtcggc tacgatcttg
251 tccgcgatct cattcttgtt ctccgcgcaa agaactatgt cgaagcgacc
301 agccgatatt atcatttcaa ctcccgcgtc gaaggtacgc cgacgtctca
351 acttcgacag cccatatgtt tcccgtgcag ttgtccccat tgcccgcgtc
401 acaaagggaa aggcctggac aaacaggccg atgaacagaa aaccaaagat
451 gtacaggatg tatagaagtc ccgacgtgcc aaggggctgt gaaggtcctt
501 gtaaagttca atcgtttgaa tctaggcacg atgtctctca tattggaaag
551 gtgatgtgta tcagcgatgt tacacgagga accggactca cacatcgcgt
601 tgggaagcga ttttgtgtga aatctgttta tgttcttgga aagatatgga
651 tggacgaaaa tatcaagact aaaaatcaca ctaatagcgt catatttttt
701 cttgttcgag accgtcgtcc tacaggaact ccacaggatt ttggggaggt
751 ttttaatatg tttgacaatg aaccgagcac tgcaacggtg aagaatatgc
801 atcgtgatcg atatcaagtg ctgcgcaaat ggcatgctac tgtgacggga
851 ggaacgtatg catcaaggga gcaagcatta gttaggaagt ttgttagggt
901 taataattat gttgtttaca atcaacaaga ggccggcaag tatgagaatc
951 atactgaaaa tgcattaatg ttgtatatgg cctgtactca cgcatcgaac
1001 cctgtatacg cgactttgaa aatccgaatc tatttttatg attcggtaac
1051 aaattaatat atattcaatt tcacatcata tgttgtccat acatcaattg
1101 tcttttccaa tacattgtcc aatacatgat aaactgctct tattacatta
1151 taaataccaa tcacccctaa catatccagg tacttaagga cctgggtttt
1201 aaagactctc aagaaaatcc cagtcggcgg ttgtaaaccc gtccagatct
1251 ggaaagttat cgcacatttg tgaagccgca gtgctttccg caggttgtgg
1301 ttgaacacta cctgcacctt gattatgtcg tgttcctcta gacaaggtct
1351 gatgtcgtgt tttattattt tgaaatagag gggatttgga acctcccaga
1401 tatacacgcc actctctgaa cgatccacag tgatgtactc ccctgtgcgt
1451 gaatccgtga tcatggcaat ttattgacat gtaatacgag catccgcacg
1501 gtagatcaat tcgtctgcgc ctgatgttct tcttcttctt ctgcggttgc
1551 gattctttcg cgaccggaat agagtggttc ttcaatggtg acgaagattg
1601 cattctttaa tgcccactgc ttcagtgctg cattcttttc ttcatcgaga
1651 tattctctgt aactactgtt tgggccttta ttgcagagga agatggtggg
1701 aattcccacc tttaatcatg actggctttc cgtacttcgt gttgctttgc
1751 cagtctctct gggcccccat gaattcttta aaatgcttta gatagtgggg
1801 atcaacgtca tcaatgacgt tgtaccaagc atcattattg tacactctcg
1851 ggcttagatc cagatggccg cacaagtaat tgtgtggacc taaagaacga
1901 gcccacgctg ttttaccagt cctactatca ccctctaaaa ctattcctat
1951 gggtctatcc gggcgcgcag cgcaacaccc cacattcttt gaaacccaat
2001 cgacgagttc ttgcggaact ctgtcgaagg atgaaactga aaaaggagaa
2051 acatacacct cagcaggagg tggaaaaata cgatctaaat tggaattcat
2101 attatgaaat tgcaaaacgt aatctttggg tgctaattct ttcaacactt
2151 tcaatgcatc ttctttgttt cctgtattta atgctcttgc gtacgcgtcg
2201 ttagctgttt cttgaccacc acgagcagat cgtccatcga tctggaagac
2251 accccattct aagacgtcac cgtctttgtc gatgtatttc ttgacgtccg
2301 atgccgattt agctccctga atgttcggat ggaaatgtgc tgaccgactt
2351 ggggacacca agtcgaagaa tctgttattc ttgcattgga actttccttc
2401 gaactggata agaacgtgga tatgcggaga cccatcttcg tgcgactctc
2451 tgcaaatttt gataaatttc ttcgaagttg gagtttctag ggttttcaat
2501 tgggaaagtg cctcttcttt ggttagagag cacttcggat atgtgaggaa
2551 atagtttttt gcacttattt tgaaaggtct aggaggagcc atcaaaacgc
2601 gctttgaatc ggggtctctc caaaactatg gtatattggg gtatggggtc
2651 tcatatatac tttggacacc aaatggcaaa attgtaatta tgcaaataat
2701 tactttaatt caaaaatgaa aaagcggcca ttcgta