Sequence of DPV Soil-borne wheat mosaic virus

Soil-borne wheat mosaic virus strain De1 coat protein gene, complete cds.

ACC No: AF519799

Dated: 2003-07-02 | Length: 1415 | CRC: 400882036

                !!NA_SEQUENCE 1.0
ID   AF519799   standard; RNA; VRL; 1415 BP.
XX
AC   AF519799;
XX
SV   AF519799.1
XX
DT   02-JUL-2003 (Rel. 76, Created)
DT   02-JUL-2003 (Rel. 76, Last updated, Version 1)
XX
DE   Soil-borne wheat mosaic virus strain De1 coat protein gene, complete cds.
XX
KW   .
XX
OS   Soil-borne wheat mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Furovirus.
XX
RN   [1]
RP   1-1415
RA   Koenig R., Huth W.;
RT   "Natural infection of wheat by the type strain of Soil-Borne Wheat Mosaic
RT   Virus in a field in Southern Germany";
RL   Unpublished.
XX
RN   [2]
RP   1-1415
RA   Koenig R., Huth W.;
RT   ;
RL   Submitted (06-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Institut fuer Pflanzenvirologie, Mikrobiologie und Biologische Sicherheit,
RL   Biologische Bundesanstalt fuer Land- und Forstwirtschaft, Messeweg 11,
RL   Braunschweig D-38104, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1415
FT                   /db_xref="taxon:28375"
FT                   /mol_type="genomic RNA"
FT                   /organism="Soil-borne wheat mosaic virus"
FT                   /strain="De1"
FT                   /segment="RNA2"
FT   CDS             309. .839
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AAP80454.1"
FT                   /translation="MAVNKGYTGYNKELNAMAATHAYIRLSTLMSQIESWQATRASVLT
FT                   HLGVMLNGVSKLGERSFFSRTKRFGAHTSDGDEIFCDLGGEAVTQILSRLTVALQSARG
FT                   EGAQTRNAKRGAAPGTSQVENEEQGQTDQTLAISNAVAELMIFVRTKDFTMNECYTQDS
FT                   FEAKYNLKWEGSS"
XX
SQ   Sequence 1415 BP; 375 A; 280 C; 361 G; 399 T; 0 other;

  AF519799  Length: 1415  July 8, 2003 08:46  Type: N  Check: 8594  ..

       1  tgttaacttg ttccgtgaga ttttaccatt cttccctgag tgagaattaa
      51  aataaacttt ggattgctac ttggatgaaa cttggagttt cacttgtctc
     101  tcgttaccat aggcacgctt taacgcgata aatcctaggt aatcagcggg
     151  gaggaaacta gtcgtctctt tcaagtggta tcggtgcgct ggataagttt
     201  gctagactca aagaccaggt ggacctgtcg ctgcagaaag cagctggtaa
     251  agtgactgct gaatctaccg gaccattatt gccaaaggtt actacaccct
     301  tgccagttat ggcggtaaat aaaggttaca ctggttacaa caaagagctt
     351  aacgcgatgg ctgcgactca cgcttacata agactcagca ctctgatgag
     401  tcagattgaa agttggcaag ctacgagggc gagtgtactt acgcatttgg
     451  gtgttatgct taatggcgtg agtaaattag gtgaacgaag tttcttctct
     501  aggactaaac gctttggagc gcatacttca gacggtgacg agattttctg
     551  cgatctggga ggagaagcgg ttacgcaaat cctttctagg ttgacagttg
     601  ctcttcaatc cgctagaggt gaaggcgctc agacgaggaa cgccaagagg
     651  ggagctgcac ctggcactag tcaagtagag aatgaagaac agggtcagac
     701  cgaccagacc cttgctattt ctaatgcagt tgctgagttg atgatctttg
     751  tgcgtacgaa agatttcact atgaatgaat gctatactca agactctttt
     801  gaggctaagt ataacttgaa atgggaaggt tcgagttgac gggacggcgt
     851  ctcgggaaag ttgagggcac aaatcgttga agaatttcag aatcgactca
     901  taattgctga cgatttgggc atctttccga gacgcgatgt tgatggtgtt
     951  atcattcgta acgaaccaga ggtagtttat tcggagctag aagataagtt
    1001  actgagcttc gaaagttctg tctatcatcc caaagcagtt actgtcgagt
    1051  ttgaagttcc tgttgctaca gggactacga ctactgatga tgagatcact
    1101  actgaagatg tggagatggt aatagtcact gaggtgctcg tcgacgacga
    1151  atctgattac tattggctgt acttcgtact actgctcaca tcttttctca
    1201  taacgtgttt cattctcctt tcgaggagat tcattcattt ccttggcaac
    1251  cgtgggggtc ctggtgcacc attgtgtaga cgctttgcta caagactttg
    1301  gtccattagg ttgtggttgt taaggaaagc gaccaggcgc tacggcaatt
    1351  taggcgtcgt gcgaaagact cactctcaaa ccacaatgcg taaatatttg
    1401  agggattaca acttt