Sequence of DPV Soil-borne wheat mosaic virus

Soil-borne wheat mosaic virus strain De1 cysteine-rich protein gene, complete cds.

ACC No: AF519800

Dated: 2003-07-02 | Length: 1029 | CRC: -1353954670

                !!NA_SEQUENCE 1.0
ID   AF519800   standard; RNA; VRL; 1029 BP.
XX
AC   AF519800;
XX
SV   AF519800.1
XX
DT   02-JUL-2003 (Rel. 76, Created)
DT   02-JUL-2003 (Rel. 76, Last updated, Version 1)
XX
DE   Soil-borne wheat mosaic virus strain De1 cysteine-rich protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Soil-borne wheat mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Furovirus.
XX
RN   [1]
RP   1-1029
RA   Koenig R., Huth W.;
RT   "Natural infection of wheat by the type strain of Soil-Borne Wheat Mosaic
RT   Virus in a field in Southern Germany";
RL   Unpublished.
XX
RN   [2]
RP   1-1029
RA   Koenig R., Huth W.;
RT   ;
RL   Submitted (06-JUN-2002) to the EMBL/GenBank/DDBJ databases.
RL   Institut fuer Pflanzenvirologie, Mikrobiologie und Biologische Sicherheit,
RL   Biologische Bundesanstalt fuer Land- und Forstwirtschaft, Messeweg 11,
RL   Braunschweig D-38104, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1029
FT                   /db_xref="taxon:28375"
FT                   /mol_type="genomic RNA"
FT                   /organism="Soil-borne wheat mosaic virus"
FT                   /strain="De1"
FT                   /segment="RNA2"
FT   CDS             117. .641
FT                   /codon_start=1
FT                   /product="cysteine-rich protein"
FT                   /protein_id="AAP80455.1"
FT                   /translation="MSTVGFHTCASCVDGPKSIKCVSKYRISVYKTLGLDVVKCRLPAD
FT                   CGVNCGMPAAFVLEQGHPKLTMDGYCGEKHRGYVLSGAWRHAQLRSLNAELDALEAREE
FT                   SLRAQIKALSAGDHCPAVLAYVPKKLTKLKAEVHDVTGKKQVCITGLVDVMDSALVRLA
FT                   PDSPPKKISSL"
XX
SQ   Sequence 1029 BP; 257 A; 199 C; 244 G; 329 T; 0 other;

  AF519800  Length: 1029  July 8, 2003 08:46  Type: N  Check: 2420  ..

       1  gtgttggtag tatgaagatg aaaatcgcta gtaagcctat ggcgtcctaa
      51  cgtgttgttt ttaatactac ttcaccaatc acacactact tcctgggtta
     101  cttgtttatt cccattatgt ctactgttgg tttccacact tgtgcgagtt
     151  gcgttgatgg acctaagtct attaaatgtg ttagtaagta tcgtattagc
     201  gtgtacaaga ctcttggtct tgatgttgtt aagtgtcgtc ttcctgcaga
     251  ttgtggcgtt aattgtggta tgcctgcggc ttttgtttta gaacagggtc
     301  atcctaagct tactatggac ggttactgtg gagagaaaca cagaggttat
     351  gttctatctg gtgcgtggcg tcatgcccaa ctccgctctc tcaatgctga
     401  gttagatgct ttggaggcta gggaagagtc tcttcgagct cagattaaag
     451  ctctcagcgc tggcgatcat tgccccgctg ttctcgcata tgtccctaag
     501  aaactgacta agttgaaagc agaggttcac gatgttactg gaaagaagca
     551  ggtgtgcatt acgggtttag ttgatgtaat ggattctgcg ttggtgcgtt
     601  tggcacctga ctcaccgcca aagaagatat cctctttgtg atgttctatg
     651  ttctcgtctc gttgttttca tattgctagt ttgtgtctac tggagtaggt
     701  aaccaggata aagaacccga acgaaaatct tgcaaaaata tttattacta
     751  atataaataa atgggcaagt ctgtcacttt ggctatcaga gttatcatac
     801  tctataaact atgacgtggt cttcacgata gaagatggtg cttgttattt
     851  cacctaaatc gaaataacga aagggcgttc tacagtacgt ttaaactgta
     901  ggttccaacc tctagttcct attgatgtaa ttgaaaaaag atcaatgggt
     951  aattatgatg aggtgcgact ggtggtcgcg gctgctatca cacagcagct
    1001  aggaggggtt caattccccc cccatccgg