Sequence of DPV Turnip mosaic virus

Turnip mosaic virus TuMV-SD2 coat protein (CP) mRNA, partial cds.

ACC No: AF539408

Dated: 2003-01-05 | Length: 867 | CRC: 8466246

                !!NA_SEQUENCE 1.0
ID   AF539408   standard; RNA; VRL; 867 BP.
XX
AC   AF539408;
XX
SV   AF539408.1
XX
DT   05-JAN-2003 (Rel. 74, Created)
DT   05-JAN-2003 (Rel. 74, Last updated, Version 1)
XX
DE   Turnip mosaic virus TuMV-SD2 coat protein (CP) mRNA, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-867
RA   Li L.-L., Wen F.-J.;
RT   "Cloning of coat protein gene of Turnip mosaic virus isolates of Shandong";
RL   Unpublished.
XX
RN   [2]
RP   1-867
RA   Li L.-L., Wen F.-J.;
RT   ;
RL   Submitted (19-AUG-2002) to the EMBL/GenBank/DDBJ databases.
RL   College of Life Science, Daizong Street 61, Tai'an, Shandong 271018, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .867
FT                   /country="China"
FT                   /db_xref="taxon:12230"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="TuMV-SD2"
FT                   /specific_host="Brassica rape"
FT   CDS             <1. .867
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAO17365.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEREKAEKERERQRQLALKKGKDVA
FT                   QEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQTMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVQGL"
XX
SQ   Sequence 867 BP; 282 A; 182 C; 238 G; 165 T; 0 other;

AF539408  Length: 867  January 14, 2003 16:44  Type: N  Check: 8732  ..

       1  gcaggtgaaa cgcttgacgc aggtttgacg gacgagcaaa agcaggcgga
      51  gaaggagaag aaggagagag agaaggcgga aaaggaacga gagaggcaga
     101  ggcagttggc actcaagaaa ggcaaggatg ttgcacaaga agagggaaaa
     151  cgcgacaagg aagtaaacgc tggaacttct ggaaccttca gtgtacccag
     201  acttaagagt ctgacaagca agatgcgcgt gccaagatac gagcaaagag
     251  tggctttaaa cctcgatcat ctaatcctat acacgccgga gcagacggat
     301  ctatccaaca cacgttcaac gcgaaagcag tttgacacat ggtttgaagg
     351  tgtaatggct gactatgaac tgacggagga caaaatgcaa atcattctca
     401  atggtttaat ggtctggtgc attgagaacg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagaca atggcccatt
     551  tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgca tttgatttct atgaaatgac ttctaggact ccaatacgtg
     701  cgagagaggc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aataatttgt tcggcttgga tggaaacgtc ggtacaacgg tagagaacac
     801  ggagaggcat acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttcaggg gttatga