Sequence of DPV Turnip mosaic virus

Turnip mosaic virus TuMV-SD5 coat protein (CP) mRNA, partial cds.

ACC No: AF539411

Dated: 2003-01-05 | Length: 867 | CRC: 725867945

                !!NA_SEQUENCE 1.0
ID   AF539411   standard; RNA; VRL; 867 BP.
XX
AC   AF539411;
XX
SV   AF539411.1
XX
DT   05-JAN-2003 (Rel. 74, Created)
DT   05-JAN-2003 (Rel. 74, Last updated, Version 1)
XX
DE   Turnip mosaic virus TuMV-SD5 coat protein (CP) mRNA, partial cds.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-867
RA   Li L.-L., Wen F.-J.;
RT   "Cloning of coat protein gene of Turnip mosaic virus isolates of Shandong";
RL   Unpublished.
XX
RN   [2]
RP   1-867
RA   Li L.-L., Wen F.-J.;
RT   ;
RL   Submitted (19-AUG-2002) to the EMBL/GenBank/DDBJ databases.
RL   College of Life Science, Daizong Street 61, Tai'an, Shandong 271018, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .867
FT                   /country="China"
FT                   /db_xref="taxon:12230"
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="TuMV-SD5"
FT                   /specific_host="radish"
FT   CDS             <1. .867
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAO17368.1"
FT                   /translation="AGETLDAGLTDEQKQAEKEKKEREKAEKERERQKQLALKKGKDVA
FT                   QEEGKRDKEVNAGTSGTFSVPRLKSLTSKMRVPRYEQRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTEKHTTEDVNRNMHN
FT                   LLGVQGL"
XX
SQ   Sequence 867 BP; 285 A; 185 C; 235 G; 162 T; 0 other;

AF539411  Length: 867  January 14, 2003 16:44  Type: N  Check: 8321  ..

       1  gcaggtgaaa cgcttgacgc aggcttgaca gacgagcaaa agcaggcgga
      51  gaaggagaag aaggagagag aaaaggcaga aaaggaacga gagaggcaga
     101  agcagttggc actcaagaaa ggcaaggatg ttgcacaaga agagggaaaa
     151  cgcgacaagg aagtaaacgc tggaacctct ggaactttca gtgtacccag
     201  gcttaagagt ttgacaagca agatgcgcgt gccaagatac gagcaaagag
     251  tggctctaaa cctcgaccat ttaatcctat acacgcctga gcagacggat
     301  ctatccaaca cacgctcaac gcgaaagcag tttgacacat ggtttgaagg
     351  tgtaatggct gactacgagc tgacggagga caaaatgcaa atcattctca
     401  atggtttgat ggtctggtgc attgagaacg gaacctcccc gaacataaac
     451  ggaatgtggg tgatgatgga cggcgatgat caggtggaat tcccgatcaa
     501  accgctcatt gaccacgcca aacccacatt taggcagata atggcccatt
     551  tcagtgacgt agctgaagcg tacatagaaa agcgtaacca agaccgacca
     601  tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc
     651  tcgatacgcg tttgatttct atgaaatgac ttctagaact ccaatacgtg
     701  cgagagaggc acacatccag atgaaagcag cagcactgcg tggcgcaaat
     751  aacaatttgt tcggcttgga tggaaacgtt ggtacaacgg tagagaacac
     801  ggagaagcac acgaccgagg acgttaatcg gaacatgcat aacttacttg
     851  gcgttcaggg gttatga