Sequence of DPV Yam mild mosaic virus

Yam mild mosaic virus isolate Mart 2 polyprotein gene, partial cds.

ACC No: AF548494

Dated: 2003-10-24 | Length: 1059 | CRC: 1034031093

                !!NA_SEQUENCE 1.0
ID   AF548494   standard; genomic RNA; VRL; 1059 BP.
XX
AC   AF548494;
XX
SV   AF548494.1
XX
DT   24-OCT-2003 (Rel. 77, Created)
DT   24-OCT-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Yam mild mosaic virus isolate Mart 2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Yam mild mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1059
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   "Origin, World-wide Dispersion, Bio-geographical Diversification, Radiation
RT   and Recombination: An Evolutionary History of Yam Mild Mosaic Virus
RT   (YMMV)";
RL   Unpublished.
XX
RN   [2]
RP   1-1059
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   ;
RL   Submitted (27-SEP-2002) to the EMBL/GenBank/DDBJ databases.
RL   INRA-CRAG-URPV, INRA, Domaine Duclos, Prise d'eau, Petit Bourg 9717O,
RL   Guadeloupe
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1059
FT                   /country="Martinique"
FT                   /db_xref="taxon:87097"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Yam mild mosaic virus"
FT                   /isolate="Mart 2"
FT                   /specific_host="Dioscorea alata"
FT   CDS             <1. .918
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AAQ12304.1"
FT                   /translation="LRRLYLGDDDNDAELYNRYLKALIDNYNHDESDVVVHQASKEQTF
FT                   DAGQFASKQPQPQGSTSGFEGPGRDVNVGTKGTFSIPRIKAPMSKLTLPKLKGKVLVNL
FT                   EHLVEYEPEQVDISNKRASQEQLGQWVEAVKTSYDVDDEQLKIILNGFMVWCIENGTSP
FT                   NINGNWYMIEDGEQIEFPLKPIVENAKPTLRQIMAHFSDLAEAYIEKRNAKKAYMPGYG
FT                   LKRNLNDYSLAPLRFSTSLKLHQRLQYVHCEAHMQMKAAALRNTKTRLFGLDGSVGTSD
FT                   ENTERHTSDDVNRDMHSLLGVRNI"
FT   mat_peptide     <1. .114
FT                   /product="NIb"
FT   mat_peptide     115. .915
FT                   /product="CP"
FT   3'UTR           919. .1059
XX
SQ   Sequence 1059 BP; 347 A; 211 C; 247 G; 254 T; 0 other;

AF548494  Length: 1059  November 11, 2003 09:09  Type: N  Check: 2746  ..

       1  cttcggagac tgtatttggg ggatgacgac aacgacgcag agctatacaa
      51  taggtatctg aaagcactca tagacaatta caatcacgat gaatctgatg
     101  tcgttgtcca tcaagcaagt aaagagcaaa cattcgatgc tggacagttt
     151  gcgagtaagc agccacaacc acagggatca acaagtggtt ttgaaggacc
     201  gggaagagat gtcaatgttg gaacaaaggg gactttcagc atccctcgca
     251  tcaaagcacc aatgagcaag ctgacactac caaagctcaa aggaaaggtt
     301  ctggtcaatc tggaacactt ggttgaatac gaaccagagc aggttgacat
     351  ttcaaataag cgagcttctc aagaacaact tggccaatgg gtggaagcag
     401  taaagacttc atatgacgtg gatgatgagc agctgaaaat cattttaaat
     451  ggatttatgg tctggtgcat tgaaaacgga acctctccaa acattaacgg
     501  aaattggtac atgatcgagg acggggagca gatagaattt ccactgaagc
     551  caattgttga aaacgcaaag ccgacacttc gacaaattat ggcgcatttt
     601  agtgacttgg ctgaggcgta cattgaaaaa cgcaatgcaa agaaagcata
     651  catgccaggg tatgggctaa agcggaatct taacgactat tcactagcac
     701  cgttacgctt ttcgacttct ttgaaattac atcaaagact ccagtacgtg
     751  cactgtgaag cgcacatgca aatgaaggca gcagctctac ggaacaccaa
     801  aactcgtctt tttggtctgg atggttccgt tggtactagc gatgaaaaca
     851  cagaaagaca cacaagcgat gacgtgaaca gagacatgca ctctcttctt
     901  ggagtgcgta acatctagat atttatataa gtaaagtttg gtaagcttat
     951  ataagtattg catagtatta gtgtggcttg accaccttaa ataaatacta
    1001  tgttcactct actggtggtt cagtgtggct cagccatcta aaacttccaa
    1051  tagagggac