Sequence of DPV Yam mild mosaic virus

Yam mild mosaic virus isolate Guad 1 polyprotein gene, partial cds.

ACC No: AF548500

Dated: 2003-10-24 | Length: 1056 | CRC: 869911008

                !!NA_SEQUENCE 1.0
ID   AF548500   standard; genomic RNA; VRL; 1056 BP.
XX
AC   AF548500;
XX
SV   AF548500.1
XX
DT   24-OCT-2003 (Rel. 77, Created)
DT   24-OCT-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Yam mild mosaic virus isolate Guad 1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Yam mild mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1056
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   "Origin, World-wide Dispersion, Bio-geographical Diversification, Radiation
RT   and Recombination: An Evolutionary History of Yam Mild Mosaic Virus
RT   (YMMV)";
RL   Unpublished.
XX
RN   [2]
RP   1-1056
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   ;
RL   Submitted (27-SEP-2002) to the EMBL/GenBank/DDBJ databases.
RL   INRA-CRAG-URPV, INRA, Domaine Duclos, Prise d'eau, Petit Bourg 9717O,
RL   Guadeloupe
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1056
FT                   /country="Guadeloupe"
FT                   /db_xref="taxon:87097"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Yam mild mosaic virus"
FT                   /isolate="Guad 1"
FT                   /specific_host="Disocorea alata"
FT   CDS             <1. .915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AAQ12310.1"
FT                   /translation="LRRLYLGDDDNDTELSNRYLRALIDNYTHDDSDVVVHQASKEQTF
FT                   DAGQFSSKQPQPQGPTSNPEGSGRDVNVGTKGTFSIPRIKAPMSKLTLPKLKGKILVNL
FT                   EHLVEYEPEQTDISNKRASQEQLGQWVEAVKTSYDVDDEQLKIILNGFMVWCIENGTSP
FT                   NINGNWYMIENGEQIEFPLKPIVENAKPTLRQIMAHFSDLAEAYIEKRNAKKAYMPGYG
FT                   LKRNLNDYSLARYAFDFFEITSKTPVRAREAHMQMKAAALRNTKTRLFGLDGSVGINDE
FT                   NTERHTSDDVNRDMHSLLGVRNI"
FT   mat_peptide     <1. .114
FT                   /product="NIb"
FT   mat_peptide     115. .912
FT                   /product="CP"
FT   3'UTR           916. .1055
XX
SQ   Sequence 1056 BP; 349 A; 195 C; 238 G; 274 T; 0 other;

AF548500  Length: 1056  November 11, 2003 09:09  Type: N  Check: 5667  ..

       1  cttcgaagac tgtatttagg ggatgatgac aatgacacag aactatccaa
      51  caggtattta agggcgctca ttgataatta cactcatgat gattctgatg
     101  ttgtcgttca ccaagcaagc aaagagcaga catttgatgc tggacaattt
     151  tcaagtaagc agccacaacc gcaagggcca acaagcaatc ctgaagggtc
     201  agggagagat gttaacgttg gaacgaaggg aacattcagc atccctcgca
     251  tcaaagcacc aatgagtaag ttaacgttgc caaaacttaa aggaaaaatt
     301  ctagtgaatc tagagcatct tgtcgaatat gaacctgagc aaactgacat
     351  ctcgaacaaa cgagcttctc aggaacaact tggccaatgg gtggaggcag
     401  ttaaaacttc atacgacgtc gatgatgaac aattgaaaat cattttgaat
     451  ggattcatgg tttggtgcat tgagaatgga acttccccaa acattaatgg
     501  aaattggtac atgattgaga acggggaaca aatagaattt ccgttgaaac
     551  caattgttga aaatgcaaag ccaacgctcc gacagataat ggctcatttc
     601  agtgatttgg ctgaggcata cattgagaag cgtaatgcga agaaagcgta
     651  tatgccaggt tatggattga agcggaatct caatgattat tcactagcac
     701  gttacgcttt tgatttcttt gaaatcacat cgaaaactcc agtgcgtgca
     751  cgtgaggcac acatgcaaat gaaagcagca gctttacgaa acactaagac
     801  ccgtcttttc ggtttagatg gttctgttgg catcaatgat gagaacacgg
     851  aaagacacac gagcgatgac gtgaacagag atatgcattc tctccttggg
     901  gtgcgtaata tctaaatatt tatataagta aagtttgtta agcttatata
     951  agtattgcat agtattagtg tggcttgtcc accataaata aatactatgt
    1001  tcactctact ggtggttcag tgtggctatg ccatcaaaaa cttccaatag
    1051  agggag