Sequence of DPV Yam mild mosaic virus

Yam mild mosaic virus isolate Guy 3 polyprotein gene, partial cds.

ACC No: AF548508

Dated: 2003-10-24 | Length: 1057 | CRC: -1575414214

                !!NA_SEQUENCE 1.0
ID   AF548508   standard; genomic RNA; VRL; 1057 BP.
XX
AC   AF548508;
XX
SV   AF548508.1
XX
DT   24-OCT-2003 (Rel. 77, Created)
DT   24-OCT-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Yam mild mosaic virus isolate Guy 3 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Yam mild mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1057
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   "Origin, World-wide Dispersion, Bio-geographical Diversification, Radiation
RT   and Recombination: An Evolutionary History of Yam Mild Mosaic Virus
RT   (YMMV)";
RL   Unpublished.
XX
RN   [2]
RP   1-1057
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   ;
RL   Submitted (27-SEP-2002) to the EMBL/GenBank/DDBJ databases.
RL   INRA-CRAG-URPV, INRA, Domaine Duclos, Prise d'eau, Petit Bourg 9717O,
RL   Guadeloupe
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1057
FT                   /country="French Guiana"
FT                   /db_xref="taxon:87097"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Yam mild mosaic virus"
FT                   /isolate="Guy 3"
FT                   /specific_host="Dioscorea trifida"
FT   CDS             <1. .915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AAQ12318.1"
FT                   /translation="LRRLYLGDDDNDTELYNRYLRALIDNYTHEDSDVVIHQASKEQTF
FT                   DAGHFSSKHPQSQDPTSSSEGSGKDVNVGTKGTFSVPRIKAPMSKLTLPKLKGKVLVNL
FT                   EHLVEYEPEQTDISNKRASQEQLGQWVEAVKTSYDVNDEQLKIILNGFMVWCIENGTSP
FT                   NINGNWHMIEDGEQIAFPLKPIVENAKPTLRQIMAHFSDLAEAYIEKRNAKKAYMPGYG
FT                   LKRNKNDFSLARYAFDFYEITSKTPVRAREAHMQMKAAPLRNTRTRLFGLDGSVGTSDE
FT                   NTERHTSDDVNRDMHSLLGVRNI"
FT   mat_peptide     <1. .114
FT                   /product="NIb"
FT   mat_peptide     115. .912
FT                   /product="CP"
FT   3'UTR           916. .1057
XX
SQ   Sequence 1057 BP; 359 A; 209 C; 227 G; 262 T; 0 other;

AF548508  Length: 1057  November 11, 2003 09:09  Type: N  Check: 6502  ..

       1  cttcgaaggt tatatttagg ggatgatgac aacgatacag agctatacaa
      51  caggtatttg agagcactca ttgacaatta tacacatgaa gattctgatg
     101  ttgtcattca tcaagcaagc aaagaacaga cattcgatgc cggacatttt
     151  tcaagcaaac atccacagtc acaagaccca acaagtagtt ctgaaggatc
     201  agggaaagat gttaatgttg gaacgaaagg aacattcagt gttccccgca
     251  tcaaagcacc aatgagcaaa ttaacattac caaaactcaa aggaaaagtt
     301  ctagttaatc tagagcatct ggttgaatac gaacctgaac aaactgatat
     351  ttcaaacaaa cgagcctctc aggaacaact tggtcagtgg gtggaagcag
     401  ttaaaacttc atacgacgtt aatgatgaac aactgaaaat cattttgaat
     451  ggcttcatgg tttggtgcat tgagaatgga acctctccaa acattaacgg
     501  caactggcac atgattgagg atggggaaca gatagcattt ccattaaaac
     551  caattgttga gaatgcaaag ccaacacttc gtcagattat ggcgcatttc
     601  agtgatttgg ctgaggcata cattgaaaag cgcaatgcga agaaagcgta
     651  catgccaggt tatggattaa agcggaataa aaacgacttc tcactagcac
     701  gttatgcttt cgatttctat gagatcacat caaagactcc agtacgcgca
     751  cgtgaggcac acatgcaaat gaaggcagca cctctgcgga acaccagaac
     801  tcgtcttttt ggtttggatg gttccgtcgg tactagcgac gaaaacacag
     851  agagacacac aagcgatgac gtgaacagag acatgcactc tcttcttgga
     901  gtgcgtaaca tctagatatt tatataagta aagtttggta agcttatata
     951  agtattgcat agtattagcg tggctcgacc accataaata aatactatgt
    1001  tcactctact ggtggttcag tgtgtgctca gccatcaaaa acttccaata
    1051  gagggac