Sequence of DPV Yam mild mosaic virus

Yam mild mosaic virus isolate Guy 7 polyprotein gene, partial cds.

ACC No: AF548512

Dated: 2003-10-24 | Length: 1057 | CRC: 749299721

                !!NA_SEQUENCE 1.0
ID   AF548512   standard; genomic RNA; VRL; 1057 BP.
XX
AC   AF548512;
XX
SV   AF548512.1
XX
DT   24-OCT-2003 (Rel. 77, Created)
DT   24-OCT-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Yam mild mosaic virus isolate Guy 7 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Yam mild mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1057
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   "Origin, World-wide Dispersion, Bio-geographical Diversification, Radiation
RT   and Recombination: An Evolutionary History of Yam Mild Mosaic Virus
RT   (YMMV)";
RL   Unpublished.
XX
RN   [2]
RP   1-1057
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   ;
RL   Submitted (27-SEP-2002) to the EMBL/GenBank/DDBJ databases.
RL   INRA-CRAG-URPV, INRA, Domaine Duclos, Prise d'eau, Petit Bourg 9717O,
RL   Guadeloupe
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1057
FT                   /country="French Guiana"
FT                   /db_xref="taxon:87097"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Yam mild mosaic virus"
FT                   /isolate="Guy 7"
FT                   /specific_host="Dioscorea trifida"
FT   CDS             <1. .915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AAQ12322.1"
FT                   /translation="LRRLYLGDDNDDAELYNRYLRALIDNYTHDDSDVVVHQASKEQAF
FT                   DAGQFSNKQPQSQGPINNSEGSGRDVNVGTKGTFSVPRIKAPMSKLTLPKLKGKVLVNL
FT                   EHLVEYEPEQTDISNKRASQEQLGQWVEAVKTSYDVDDEQLKIILNGFMVWCIENGTSP
FT                   NINGNWYMIEDGEQIGFPLKPIVENAKPTLRQVMAHFSDLAEAYIEKRNAKKAYMPGYG
FT                   LKRNLNDYSLARYAFDFYEITSKTPVRAREAHMQMKAAPLRNTRTRLFGLDGSVGTSDE
FT                   NTERHTSDDVNRDMHSLLGVRNI"
FT   mat_peptide     <1. .114
FT                   /product="NIb"
FT   mat_peptide     115. .912
FT                   /product="CP"
FT   3'UTR           916. .1057
XX
SQ   Sequence 1057 BP; 350 A; 198 C; 237 G; 272 T; 0 other;

AF548512  Length: 1057  November 11, 2003 09:09  Type: N  Check: 2936  ..

       1  cttcgaaggt tatatttagg agatgataat gacgatgcag agctatacaa
      51  caggtatttg agagcactca ttgacaacta cactcatgat gattctgatg
     101  ttgtcgtcca ccaagcaagc aaggaacagg catttgatgc tggacagttt
     151  tcaaacaaac agccacaatc acaaggccca ataaacaatt ctgaagggtc
     201  agggagggac gttaatgttg gaacgaaagg aacgttcagt gtgccccgca
     251  tcaaagcacc aatgagcaaa ttgacattac caaaactcaa aggaaaagtt
     301  ctagtgaatc tagaacatct ggttgaatat gaacctgaac aaactgacat
     351  ttcaaataaa cgagcttccc aggaacagct tggtcaatgg gtggaagctg
     401  ttaaaacttc atatgatgtt gatgacgaac agctgaaaat cattttgaat
     451  ggattcatgg tttggtgcat tgagaatgga acctctccaa acatcaacgg
     501  aaattggtat atgattgagg atggggaaca aatcggattt ccattaaaac
     551  caattgttga gaatgcaaag ccaacacttc gtcaggtcat ggcacatttc
     601  agtgatttgg ctgaggcata cattgaaaag cgtaatgcga agaaagcgta
     651  tatgccaggt tatggattga aacggaatct caatgattat tcactagcac
     701  gttatgcttt tgatttctac gagattacat cgaagactcc agtacgcgca
     751  cgtgaggcac acatgcaaat gaaagcagca cctttgcgga acaccagaac
     801  tcgtcttttc ggtctggatg gttctgttgg taccagcgat gaaaacacag
     851  agagacacac gagcgatgat gtgaacagag acatgcactc ccttcttgga
     901  gtgcgcaaca tttagatatt tatataagta aaagtttgat aaacttatat
     951  aagtattgca tagtattagt gtggtttgac caccttaaat aagtactatg
    1001  ttcactctac tggtggttca gtgtggccat gccatcaaaa acttccaata
    1051  gagggac