Sequence of DPV Yam mild mosaic virus

Yam mild mosaic virus isolate Togo 1 polyprotein gene, partial cds.

ACC No: AF548514

Dated: 2003-10-24 | Length: 1057 | CRC: -1413144681

                !!NA_SEQUENCE 1.0
ID   AF548514   standard; genomic RNA; VRL; 1057 BP.
XX
AC   AF548514;
XX
SV   AF548514.1
XX
DT   24-OCT-2003 (Rel. 77, Created)
DT   24-OCT-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Yam mild mosaic virus isolate Togo 1 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Yam mild mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1057
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   "Origin, World-wide Dispersion, Bio-geographical Diversification, Radiation
RT   and Recombination: An Evolutionary History of Yam Mild Mosaic Virus
RT   (YMMV)";
RL   Unpublished.
XX
RN   [2]
RP   1-1057
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   ;
RL   Submitted (27-SEP-2002) to the EMBL/GenBank/DDBJ databases.
RL   INRA-CRAG-URPV, INRA, Domaine Duclos, Prise d'eau, Petit Bourg 9717O,
RL   Guadeloupe
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1057
FT                   /country="Togo"
FT                   /db_xref="taxon:87097"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Yam mild mosaic virus"
FT                   /isolate="Togo 1"
FT                   /specific_host="Dioscorea alata"
FT   CDS             <1. .915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AAQ12324.1"
FT                   /translation="LRRLYLGDDDNDAELYNRYLKALIDNYNHDEFDVVVHQASKEQTF
FT                   DAGQFASKQPQTQGPTSSSEGPGRDVNVGTKGTFSIPRIKAPMSKLTLPKLKGKVLVNL
FT                   EHLVEYEPEQVDISNKRASQEQLGQWVEAVKTSYDVDDEQLKIILNGFMVWCIENGTSP
FT                   NINGNWYMIENGEQVEFPLKPIVENAKPTLRQIMAHFSDLAEAYIEKRNAKKAYMPGYG
FT                   LKRNLNDYSLARYAFDFFEITSKTPIRAREAHMQMKAAALRNTRTRLFGLDGSVSNNEE
FT                   NTERHTSDDVSKDMHSLLGVRNI"
FT   mat_peptide     <1. .114
FT                   /product="NIb"
FT   mat_peptide     115. .912
FT                   /product="CP"
FT   3'UTR           916. .1057
XX
SQ   Sequence 1057 BP; 356 A; 197 C; 239 G; 265 T; 0 other;

AF548514  Length: 1057  November 11, 2003 09:09  Type: N  Check: 9064  ..

       1  cttcgaagat tgtatctagg ggatgatgac aacgacgcag agctgtacaa
      51  cagatatctg aaagcactca ttgataacta caatcatgat gaatttgatg
     101  tcgtcgtcca tcaagcaagt aaggaacaga catttgacgc cggacagttt
     151  gcaagtaagc agccacaaac acaagggcca acaagtagct ctgaaggacc
     201  aggaagagac gttaatgttg gaacaaaggg gacattcagt attccgcgca
     251  ttaaagcacc aatgagtaaa ttgacattgc caaaactcaa aggaaaagtt
     301  ttagtaaatc tagaacattt agttgagtat gagccagagc aagtcgacat
     351  ttcaaacaaa agagcttctc aggaacaact cggtcaatgg gtggaggcag
     401  tcaaaacctc gtatgatgtg gatgatgagc aactgaaaat cattttgaat
     451  ggattcatgg tatggtgtat tgaaaacgga acctctccaa acatcaacgg
     501  gaattggtac atgattgaaa atggagagca ggtagagttt cctttgaaac
     551  caattgttga aaatgcaaag ccgacacttc gacagatcat ggcacatttc
     601  agtgatttgg ctgaagcgta catcgagaag cgcaatgcga agaaagcgta
     651  catgccaggt tatggattaa agcgaaatct caatgattat tcactagcac
     701  gctatgcttt tgatttcttt gagattacat cgaaaacccc aatacgtgca
     751  cgtgaggcac acatgcaaat gaaggcagca gctttacgga ataccagaac
     801  tcgtcttttt ggtctagacg gttctgtcag caacaacgag gaaaacacag
     851  aaaggcacac aagcgatgat gtgagcaagg acatgcactc tcttcttgga
     901  gtgcgcaata tctagatatt tatataagta aagttcgttt aaacttatat
     951  aagtattgca tagtattagt gtggttcgtc caccttaaat aaatactatg
    1001  ttcactctac tggtggttta gtgtggctat gccatcatta acttccaata
    1051  gagggac