Sequence of DPV Yam mild mosaic virus

Yam mild mosaic virus isolate PNG 2 polyprotein gene, partial cds.

ACC No: AF548524

Dated: 2003-10-24 | Length: 1014 | CRC: 1728445046

                !!NA_SEQUENCE 1.0
ID   AF548524   standard; genomic RNA; VRL; 1014 BP.
XX
AC   AF548524;
XX
SV   AF548524.1
XX
DT   24-OCT-2003 (Rel. 77, Created)
DT   24-OCT-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Yam mild mosaic virus isolate PNG 2 polyprotein gene, partial cds.
XX
KW   .
XX
OS   Yam mild mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1014
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   "Origin, World-wide Dispersion, Bio-geographical Diversification, Radiation
RT   and Recombination: An Evolutionary History of Yam Mild Mosaic Virus
RT   (YMMV)";
RL   Unpublished.
XX
RN   [2]
RP   1-1014
RA   Bousalem M., Dallot S., Fuji S., Natsuaki K.T.;
RT   ;
RL   Submitted (27-SEP-2002) to the EMBL/GenBank/DDBJ databases.
RL   INRA-CRAG-URPV, INRA, Domaine Duclos, Prise d'eau, Petit Bourg 9717O,
RL   Guadeloupe
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1014
FT                   /country="Papua New Guinea"
FT                   /db_xref="taxon:87097"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Yam mild mosaic virus"
FT                   /isolate="PNG 2"
FT                   /specific_host="Dioscorea alata"
FT   CDS             <1. .915
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /protein_id="AAQ12334.1"
FT                   /translation="LRRLYLGDDDNDAELYNRYLKALIDNYNHDESDVVVHQASKEQTF
FT                   DAGQFTSKQSQPQGQTSSSEGPGRDVNVGTKGTFSIPRIKAPMSKLTLPKLKGKVLVNL
FT                   EHLVEYEPEQVDISNKRASQEQLGQWVEAVKTSYDVDDEQLKIILNGFMVWCIENGTSP
FT                   NINGNWYMIENGEQIEFPLKPIVENAKPTLRQIMAHFSDLAEAYIEKRNAKKAYMPGYG
FT                   LKRNLNDYSLARYAFDFFEITSKTPVRAREAHMQMKAAALRNTRTRLFGLDGSVSNNEE
FT                   NTERHTSDDVSKDMHSLLGVRNI"
FT   mat_peptide     <1. .114
FT                   /product="NIb"
FT   mat_peptide     115. .912
FT                   /product="CP"
FT   3'UTR           916. .>1014
XX
SQ   Sequence 1014 BP; 346 A; 191 C; 231 G; 246 T; 0 other;

AF548524  Length: 1014  November 11, 2003 09:10  Type: N  Check: 2375  ..

       1  cttcgaagat tgtatttagg agatgatgat aacgacgcag agttatacaa
      51  cagatacttg aaagcgctca tagataatta taatcacgac gaatccgatg
     101  ttgtcgtcca tcaagcaagt aaggagcaaa cattcgatgc tggacagttt
     151  acaagcaagc agtcacaacc acaggggcaa acaagtagtt ctgaaggacc
     201  aggaagagac gtcaatgttg gaacgaaggg gacatttagc attcctcgca
     251  tcaaagcacc aatgagcaaa ctgacattgc caaaactcaa aggaaaagtc
     301  ctagtgaatc tggaacattt ggtcgagtat gaaccagagc aagtcgacat
     351  ttcgaacaaa agagcttccc aggagcagct tggacaatgg gtggaggcag
     401  ttaaaacctc atatgacgtg gatgatgagc aattgaaaat tattttgaac
     451  ggattcatgg tatggtgtat tgagaatgga acctctccaa acatcaacgg
     501  aaactggtac atgatcgaga atggagagca gatagagttt cctttgaaac
     551  caattgttga gaatgcaaag ccaacacttc gacagatcat ggcacacttt
     601  agtgatttag ctgaggcgta cattgaaaag cgaaatgcga agaaagcgta
     651  tatgccaggt tatggattaa agcggaatct caacgattat tcactagcac
     701  gctatgcttt tgatttcttt gaaattacat cgaagactcc agtgcgtgca
     751  cgtgaggcac acatgcaaat gaaggcagca gccttaagga acaccagaac
     801  tcgacttttc ggtttagatg gttctgtcag caataacgaa gagaacacag
     851  aacgacacac aagtgatgat gtgagcaaag acatgcactc tcttctcgga
     901  gtgcgcaata tctagatatt tatataagta aagtctatta aacttatata
     951  agtattgcat agtatcagtg tggctcgtcc accttaaata aatactatgt
    1001  tcactctact ggtg