Sequence of DPV Infectious salmon anemia virus
Infectious salmon anemia virus genomic RNA for putative polymerase (PB1) protein
ACC No: AJ002475
Dated: 2005-10-04 | Length: 2245 | CRC: -1393348196
ID ISAVPB1P standard; genomic RNA; VRL; 2245 BP.
XX
AC AJ002475;
XX
SV AJ002475.1
XX
DT 03-MAR-1998 (Rel. 54, Created)
DT 04-OCT-2005 (Rel. 85, Last updated, Version 6)
XX
DE Infectious salmon anemia virus genomic RNA for putative polymerase (PB1)
DE protein
XX
KW PB1 gene; polymerase.
XX
OS Infectious salmon anemia virus
OC Viruses; ssRNA negative-strand viruses; Orthomyxoviridae; Isavirus.
XX
RN [1]
RC revised bu [3]
RA Krossoey B.;
RT ;
RL Submitted (07-NOV-1997) to the EMBL/GenBank/DDBJ databases.
RL Krossoey B., Department of Fisheries and Marine Biology, Fish Health,
RL Bergen High Technology Center, 5020 Bergen, NORWAY.
XX
RN [2]
RX PUBMED; 9971796.
RA Krossoey B., Hordvik I., Nilsen F., Nylund A., Endresen C.;
RT "The putative polymerase sequence of infectious salmon anemia virus
RT suggests a new genus within the Orthomyxoviridae";
RL J. Virol. 73(3):2136-2142(1999).
XX
RN [3]
RP 1-2245
RA Krossoey B.;
RT ;
RL Submitted (27-OCT-1998) to the EMBL/GenBank/DDBJ databases.
RL Krossoey B., Department of Fisheries and Marine Biology, Fish Health ,
RL Bergen High Technology Center, 5020 Bergen, NORWAY.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2245
FT /db_xref="taxon:55987"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Infectious salmon anemia virus"
FT /isolate="Sotra 92/93"
FT CDS 37. .2163
FT /db_xref="GOA:O56960"
FT /db_xref="InterPro:IPR001407"
FT /db_xref="InterPro:IPR007099"
FT /db_xref="UniProtKB/TrEMBL:O56960"
FT /gene="PB1"
FT /function="polymerase"
FT /protein_id="CAA05486.1"
FT /translation="METLVGGLLTGEDSLVSMSNDVSCLYVYDGPMRVFSQNALMPTLQ
FT SVKRSDQFSKGKTKRFIIDLFGMKRMWDIGNKHLEDENLDETVGVADLGLVKYLINNKY
FT DEAEKTSLRKPMEEAFEKSMNEEFVVLNKGKSANDIISDTNAVCKFCVKNWIVATGFRG
FT RTMSDLIEHHFRCMQGKQEVKGYIWKHKYNERLKRKQLSKEEVKFDREEYTSRSFRLLS
FT FLKNSERTKLEPRAVFTAGVPWRAFIFVLEQTMLVVNKLDPNSVIWMGSDAKINTTNSR
FT IKEIGMKNQGQTLVTLTGDNSKYNESMCPEVMMIFLRELGIKGPMLEVLDYALWQFSQK
FT SVKPVAPIKKRTSRSTVVVKADAVNECRDAFNEKELELIQGVEWMEHGFIRVRRGMLMG
FT MANNAFTTASTIASSFSFTPEAVYTLQSSDDFVTGSCGRDVQHARQRLEMALKVSKAAG
FT LNVSQKKSFYVEGTTFEFNSMFVRDGKVMANGGNFENITVPGGLGPSTDLFVVGKQARN
FT SMLRGNLSFSQAMEMCKIGITNVEKVYYGNRKYQELKNEIREKCGEETMSIPESMGGDR
FT KPKPWELPQSFDGIALKEAVNRGHWKAAKYIKSCCSIEFDEEGDQSWDTSKTALVVIRK
FT NETDMRRRTVKTRNPKDKIFNDAMNKAKRMYETVVDRNPLLGLKGKGGRLTVKDLKARK
FT LIDEVEVIKKKKHV"
XX
SQ Sequence 2245 BP; 791 A; 379 C; 572 G; 503 T; 0 other;
AJ002475 Length: 2245 04-OCT-2005 Type: N Check: 7602 ..
1 gaatgtaact atagcaaaga acgctcttta ataaccatgg aaactctagt
51 aggtgggctg ctgactgggg aagattctct ggtcagtatg tcgaatgatg
101 tgtcttgtct ttacgtttat gatggaccaa tgagggtttt ttcacaaaac
151 gcactaatgc ctacgttgca aagtgtgaag agaagtgacc agttctcaaa
201 agggaaaaca aagagattta ttatagattt gtttggaatg aaaaggatgt
251 gggacatagg gaacaaacac ctagaagatg aaaatttgga cgaaactgtt
301 ggtgttgcag acttaggcct tgtgaaatac ctgataaaca acaagtacga
351 tgaggcagag aaaactagct taaggaagcc aatggaagaa gctttcgaga
401 agtctatgaa cgaagaattt gtcgtactga acaaagggaa atcagccaat
451 gacattatct ccgacacaaa cgccgtgtgt aaattctgcg ttaaaaactg
501 gatagtagca acaggtttca gaggaagaac catgtcagac ctgattgaac
551 accatttcag gtgtatgcag gggaaacaag aagtgaaagg atacatatgg
601 aaacataaat acaacgagag acttaagaga aaacaactaa gcaaagaaga
651 agttaagttc gacagagagg aatacacctc gagaagcttc agactacttt
701 cattcctgaa aaacagcgaa agaactaagc tggagccgag agcagtgttc
751 acagctggag taccttggag ggctttcatc ttcgttctag aacagacaat
801 gctcgtcgtg aacaagttgg acccaaactc agtcatctgg atgggaagcg
851 atgccaaaat aaacacgaca aactccagga taaaggagat cggaatgaag
901 aaccaagggc aaacactggt aacgctcact ggagacaact ctaagtacaa
951 tgagagcatg tgcccagaag tgatgatgat tttcctaaga gaacttggga
1001 taaagggacc aatgctggaa gtactcgact atgctttgtg gcagttttct
1051 caaaaaagtg tcaaaccagt agcacctata aagaaaagaa caagcaggtc
1101 tactgttgta gtgaaggcgg acgctgttaa cgaatgcaga gacgctttca
1151 atgaaaagga gctggaactc atacaaggag tagagtggat ggaacatgga
1201 ttcatcagag tgagaagagg aatgttgatg ggaatggcaa acaatgcttt
1251 tacaacggca tctacgattg cttcttcttt cagtttcaca cctgaggcag
1301 tgtacacact acaaagttcg gatgacttcg tgactgggag ctgtgggaga
1351 gacgtacaac atgcaagaca aagactcgaa atggctctta aagtgagcaa
1401 agctgcaggt ttgaacgttt ctcagaagaa gtctttctat gtggagggga
1451 cgaccttcga gttcaactct atgttcgtaa gagacgggaa agtcatggca
1501 aatgggggca actttgaaaa cataacagtt ccaggtggac ttgggccctc
1551 aacagatcta tttgttgttg ggaaacaggc aagaaactcc atgttgagag
1601 gaaacctctc tttcagccaa gccatggaaa tgtgtaaaat tggaatcaca
1651 aatgttgaaa aggtgtacta tgggaacaga aaataccaag aactgaagaa
1701 cgaaatcagg gaaaaatgtg gagaagagac aatgtctata cctgagagca
1751 tgggaggtga taggaaaccc aaaccttggg aacttcctca gagtttcgat
1801 ggaattgcac tcaaagaagc tgtaaacagg ggacactgga aggccgccaa
1851 gtacataaaa tcttgttgca gcatcgagtt cgacgaggaa ggagaccagt
1901 cctgggacac gtccaaaacg gcactagtgg taatcagaaa aaacgaaact
1951 gacatgagaa gaagaacagt taaaacaagg aaccctaagg acaagatctt
2001 caatgatgca atgaacaagg ccaagaggat gtacgaaaca gtggtggaca
2051 gaaatccttt acttggactt aaggggaaag gtgggagact gactgtaaag
2101 gatctgaaag caagaaagct tatcgacgag gtggaggtga ttaagaagaa
2151 aaagcatgtt tgattttgtg tgatggtgta tatacccttt tgtattaata
2201 aactgtgtgt aataacggaa ttgacgatat atttttaata agtga