Sequence of DPV Barley yellow dwarf virus-PAV

Barley yellow dwarf virus mRNA for coat protein and 17 KDa protein, isolate MA9513

ACC No: AJ007924

Dated: 2002-10-05 | Length: 603 | CRC: 2030069062

                !!NA_SEQUENCE 1.0
ID   BYD7924    standard; RNA; VRL; 603 BP.
XX
AC   AJ007924;
XX
SV   AJ007924.1
XX
DT   14-JUL-1998 (Rel. 56, Created)
DT   05-OCT-2002 (Rel. 73, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus mRNA for coat protein and 17 KDa protein, isolate
DE   MA9513
XX
KW   17kDa protein; coat protein.
XX
OS   Barley yellow dwarf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
XX
RN   [1]
RP   1-603
RA   Bencharki B.;
RT   ;
RL   Submitted (11-JUL-1998) to the EMBL/GenBank/DDBJ databases.
RL   Bencharki B., Plant virology, Institut de Biologie Moleculaire des plantes,
RL   12 rue General Zimmer, Strasbourg 67084, FRANCE.
XX
RN   [2]
RA   Bencharki B., Mutterer J., EL Yamani M., Ziegler-Graff V., Zaoui D.,
RA   Jonard G.;
RT   "Severity of infection of Moroccan barley yellow dwarf virus PAV isolates
RT   correlates with variability in their coat protein sequences";
RL   Ann. Appl. Biol. 134:89-99(2002).
XX
DR   SPTREMBL; Q9YQP3; Q9YQP3.
DR   SPTREMBL; Q9YQP4; Q9YQP4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .603
FT                   /db_xref="taxon:12037"
FT                   /virion
FT                   /organism="Barley yellow dwarf virus"
FT                   /isolate="MA9513"
FT                   /strain="PAV-type"
FT   CDS             1. .603
FT                   /db_xref="SPTREMBL:Q9YQP4"
FT                   /gene="ORF3"
FT                   /product="coat protein"
FT                   /protein_id="CAA07742.1"
FT                   /translation="MDSVGRRGPKRANQNGPRRRRRKAIRPVVVVQPNRAGPRRRNGRR
FT                   KGRGGANPVFRPTGGTEVFVFSVDNLKANSSGAIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTAGAIFIELDTACKQSALGSYINSFTISRTASKVFRAEAINGKEF
FT                   QESTIDQFWMLYKANGTTTDTAGQFIITMSVSLMTAK"
FT   CDS             44. .505
FT                   /db_xref="SPTREMBL:Q9YQP3"
FT                   /gene="ORF4"
FT                   /product="17 KDa protein"
FT                   /protein_id="CAA07743.1"
FT                   /translation="MAQEGGAVKQFGQWLWSNPIEQDPDDEMVDAREEEGQILYLDQQA
FT                   GLRYSYSQSTTLKPTLPGQSNSAPVYRNAQRFQTEYLSPTTVTRSQVSVLSLSHTRPQL
FT                   RPALSLLNSTPRANNQPWVATLIPSQSAGPPQRSSEPKRLTGRNSRNQR"
XX
SQ   Sequence 603 BP; 181 A; 153 C; 147 G; 122 T; 0 other;

AJ007924  Length: 603  October 15, 2002 10:09  Type: N  Check: 7527  ..

       1  atggattcag taggtcgtag aggacctaaa cgagcaaatc aaaatggccc
      51  aagaaggcgg cgccgtaaag caattcggcc agtggttgtg gtccaaccca
     101  atcgagcagg acccagacga cgaaatggtc gacgcaaggg aagaggaggg
     151  gcaaatcctg tatttagacc aacaggcggg actgaggtat tcgtattctc
     201  agtcgacaac cttaaagcca actcttccgg ggcaatcaaa ttcggcccca
     251  gtctatcgca atgcccagcg ctttcagacg gaatacttaa gtcctaccac
     301  cgttacaaga tcacaagtat ccgtgttgag tttaagtcac acgcgtccgc
     351  aactacggcc ggcgctatct ttattgaact cgacaccgcg tgcaaacaat
     401  cagccctggg tagctacatt aattccttca caatcagcag gaccgcctca
     451  aaggtcttca gagccgaagc gattaacggg aaggaattcc aggaatcaac
     501  gatagaccag ttttggatgc tttacaaggc caatggaacc accactgaca
     551  cggcaggaca attcattatc acgatgagtg tcagtttaat gacggcaaaa
     601  tag