Sequence of DPV Barley yellow dwarf virus-PAS

Barley yellow dwarf virus mRNA for coat protein and 17 KDa protein isolate MA9516

ACC No: AJ007926

Dated: 2002-10-05 | Length: 603 | CRC: 1700302837

                !!NA_SEQUENCE 1.0
ID   BYD7926    standard; RNA; VRL; 603 BP.
XX
AC   AJ007926;
XX
SV   AJ007926.1
XX
DT   14-JUL-1998 (Rel. 56, Created)
DT   05-OCT-2002 (Rel. 73, Last updated, Version 2)
XX
DE   Barley yellow dwarf virus mRNA for coat protein and 17 KDa protein isolate
DE   MA9516
XX
KW   17kDa protein; coat protein.
XX
OS   Barley yellow dwarf virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Luteovirus.
XX
RN   [1]
RP   1-603
RA   Bencharki B.;
RT   ;
RL   Submitted (11-JUL-1998) to the EMBL/GenBank/DDBJ databases.
RL   Bencharki B., Plant virology, Institut de Biologie Moleculaire des plantes,
RL   12 rue General Zimmer, Strasbourg 67084, FRANCE.
XX
RN   [2]
RA   Bencharki B., Mutterer J., EL Yamani M., Ziegler-Graff V., Zaoui D.,
RA   Jonard G.;
RT   "Severity of infection of Moroccan barley yellow dwarf virus PAV isolates
RT   correlates with variability in their coat protein sequences";
RL   Ann. Appl. Biol. 134:89-99(2002).
XX
DR   SPTREMBL; Q9YIU0; Q9YIU0.
DR   SPTREMBL; Q9YJ56; Q9YJ56.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .603
FT                   /db_xref="taxon:12037"
FT                   /virion
FT                   /organism="Barley yellow dwarf virus"
FT                   /isolate="MA9516"
FT                   /strain="PAV-type"
FT   CDS             1. .603
FT                   /db_xref="SPTREMBL:Q9YJ56"
FT                   /gene="ORF3"
FT                   /product="coat protein"
FT                   /protein_id="CAA07746.1"
FT                   /translation="MDSVGRRGPKRANQNGPRRRRRKAIRPVVVVQPNRAGPRRRNGRR
FT                   AGRRGPDSIPGSAGRTEVFIFSVDNLKANSSGTIKFGPSLSQCPALSDGILKSYHRYKI
FT                   TSIRVEFKSHASATTSGAIFVELDTACKQSALGSYINSFTISKTASKSFRAEAINGKDF
FT                   QESTIDQFWLLYKANGTTTDTAGQFIIRINVSMLTPK"
FT   CDS             44. .505
FT                   /db_xref="SPTREMBL:Q9YIU0"
FT                   /gene="ORF4"
FT                   /product="17 KDa protein"
FT                   /protein_id="CAA07747.1"
FT                   /translation="MAQEGGAVKQFGQWLWSNPIEQDPDDEMVDAQEEEGQILYLDQQA
FT                   GLRYSYSQSTTLKPTLPGQSNSAPVYRNAQRFQTEYLSPTTVTRSQVSVLSLSHTRPPL
FT                   RRALSLLNSTPRASNQPWVATLIPSPSAKLPPNPSEPRRLMGRTSKNQR"
XX
SQ   Sequence 603 BP; 183 A; 155 C; 139 G; 126 T; 0 other;

AJ007926  Length: 603  October 15, 2002 10:09  Type: N  Check: 8655  ..

       1  atggattcag taggtcgtag aggacctaaa cgagcaaatc aaaatggccc
      51  aagaaggcgg cgccgtaaag caattcggcc agtggttgtg gtccaaccca
     101  atcgagcagg acccagacga cgaaatggtc gacgcgcagg aagaagaggg
     151  ccagattcta tacctggatc agcaggcagg actgaggtat tcatattctc
     201  agtcgacaac cttaaagcca actcttccgg gacaatcaaa ttcggcccca
     251  gtctatcgca atgcccagcg ctttcagacg gaatacttaa gtcctaccac
     301  cgttacaaga tcacaagtat ccgtgttgag tttaagtcac acgcgtccgc
     351  cactacgtcg ggcgctatct ttgttgaact cgacaccgcg tgcaagcaat
     401  cagccctggg tagctacatt aattccttca ccatcagcaa aactgcctcc
     451  aaatccttca gagccgaggc gattaatggg aaggacttcc aagaatcaac
     501  gatagaccag ttctggctac tatacaaggc aaatgggaca actactgaca
     551  ctgctggaca atttataata aggataaatg tcagtatgct gactccaaaa
     601  tag