Sequence of DPV Wheat yellow mosaic virus
Wheat yellow mosaic virus, Chinese (Yangzhou) complete sequence, isolate RNA1
ACC No: AJ131981
Dated: 2000-06-21 | Length: 7635 | CRC: 966101746
!!NA_SEQUENCE 1.0
ID WYE131981 standard; RNA; VRL; 7635 BP.
XX
AC AJ131981;
XX
SV AJ131981.1
XX
DT 04-NOV-1999 (Rel. 61, Created)
DT 21-JUN-2000 (Rel. 64, Last updated, Version 2)
XX
DE Wheat yellow mosaic virus, Chinese (Yangzhou) complete sequence, isolate
DE RNA1
XX
KW coat protein; cylindrical inclusion protein; NIa-Pro protease;
KW NIa-Vpg protein; NIb polymerase; P3 protein; polyprotein.
XX
OS wheat yellow mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Bymovirus.
XX
RN [1]
RC Revised by author 19-MAY-1999 & 22-JUN-1999
RP 1-7635
RA Adams M.J.;
RT ;
RL Submitted (17-FEB-1999) to the EMBL/GenBank/DDBJ databases.
RL Adams M.J., Crop and Disease Management, IACR-Rothamsted, Harpenden, Herts
RL AL5 2JQ, UNITED KINGDOM.
XX
RN [3]
RA Chen J., Sohn A., Chen J., Lei J., Cheng Y., Schulze S., Steinbiss H.H.,
RA Antoniw J.F., Adams M.J.;
RT "Molecular comparisons amongst wheat bymovirus isolates from Asia, North
RT America and Europe";
RL Plant Pathol. 48:642-647(1999).
XX
RN [4]
RA Chen J., Chen J.P., Yang J.P., Cheng Y., Diao A., Adams M.J., Du J.;
RT "Differences of cultivar response and complete sequence analysis of two
RT strains of wheat yellow mosaic bymovirus in China";
RL Plant Pathol. 49:370-374(2000).
XX
DR SPTREMBL; Q9QBG4; Q9QBG4.
XX
FH Key Location/Qualifiers
FH
FT source 1. .7635
FT /chromosome="RNA1"
FT /country="China:Jiangsu"
FT /db_xref="taxon:75746"
FT /virion
FT /organism="wheat yellow mosaic virus"
FT /isolate="Yangzhou"
FT /specific_host="Wheat"
FT 5'UTR 1. .162
FT CDS 163. .7377
FT /db_xref="SPTREMBL:Q9QBG4"
FT /product="putative polyprotein"
FT /protein_id="CAB60138.1"
FT /translation="MEQTAAQTAARYATHTNSAQEQPPVSPMNLSANFVAPELFYASNV
FT EKIKSIIRMRSTTRIIDAISRDFELVAFLILSPAHLMQLETTLRCEMRSSIVPIANSDA
FT GFETCAVLKTALDGMKYHFGTTTLEQGWTSMMRHADSCLQESSSSAVAMLQTQVQKVGS
FT LLISGKNRVESCELYVLHLTARAFRTEYGLKGTCFGEHCALLHDLKACICGTVPKEFLW
FT AKTKKHSMFTIPEWIARTPTDCFMLCLRAIPIFRRCTMAMSLLYWSCVATVNFPSVMAF
FT LFKRQFTKYIAHSFAKHSIYFLMLGIVALLWAFRTYASKNPKIALQARSANEKEKKLMM
FT LLASAVGITYLFDYDIAEALGNSLHKISRLSSYLMDDHQGVASRMFSASYGLQAGDNTE
FT DAVTTIISDLLSVTFQIVEEDTTAGVLEEVSDTTFSSWVSVNTISGRNMSRPLQYPVNQ
FT TYPLTPMNVLLQAQAMVDSDNCWSMVVGHTGSGKSTYLPVQYSNYLAKKLDRRQQILVC
FT EPTQAATENVCSGIAANLGRAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMDPGFISTF
FT DAIFLDEAHDVKEHSLVFESICNNFKSVRKFYVSATPRDGSSCPDATRKFPLTVQQSVC
FT DSYKKFIAAQGGDDLLDVTKYDTVLVFLAGRPECVKAANAWNASITGEKRAFSLSSDNF
FT ATDFAMLTERLKTHKTIIFTTNIIETGVTLSVDCVVDFGYTMRPSLDLNHKTLRLERRR
FT VTANERKQRIGRAGRLKEGHAIVCGDEDRSVNVVSPDVLYGAALLSFKHNVPFYMNDTF
FT ESSWLEGITKSQADTMTIFKLPIFLTRDLVNSDGSVVKEFLDILKKHQFTTSDIKQAPH
FT SIARHLFPTWASYFALFQSINYGEEKDEIPSNLRHARVPFSISTLSKFDWNALALACEQ
FT HRPTVISSFQGLDQPARVVTLQTNSANILGSIAHLCNMRNNYKALIDSNNHVKQSMATN
FT VMFKWFSSTRITADLDRNLSKCLANLSVVETTISSLKQISAGNSQVMASPILQSHLESI
FT IELQSNDMLTDETLSNALGIFNPKTNLFLLLATKGFKLVYVICLLILINLIYRLLSHWR
FT AWLKSKNDNVNSDALTNTMTVQEGSEILKEVLKMTPAMRREVTKDMKVAVADNNSTFSF
FT VFPDEHIDLEGKGNKYRPREDARLMYSTRDDATFDTWNEKAKEKRKKISDRAEPEMKQP
FT YQKRPYYNFYDLQTDSNILEAIFYTTEGDEFFRTANPNKDMHSVAEKLKAFLDTKPIIG
FT RHQRQLLEETAQVVIKDDKGTAHRMDISTHNPNTLKNNGSGRVGYDEHRGDFRQESPAL
FT ESPYELEAEFGNSKDEVMLEASTGILLSQVSVDVATRIGRISIGTFNVNCFLYSDWILA
FT PAHFQDRNGAVTIEFPDQTVSTTTDNLNAHGVKRFYGLDLIAIRRPPSLRPEKKLVKAF
FT AITEPVLAQMVFIDSQGIRKFSQSDWIRQEAGSNRWSHKISTQNGMCGCPVLDVGKNRL
FT IGIHVATNRTTGRNEFQPFTREAVDFINGPGNKVPFSPWIFNRPACGYKQGEATFASRT
FT IQNQASDTLSKINNSVLGFGSDLKGQLVQPVTPALRTRFEALFGGGSFELVGTMNKGLI
FT DKHTIVGENDNVHDFMREHPTFAWLQGFMDEYAPSVLNYSAYYKDLCKYNRKKHQLSFS
FT PHELRSATAGMIRMLEDAGLTQGDVRTPQQVVSDMQWNTSAGPSYQGKKRDVCAHLSEQ
FT EVLHLAETSRQQFLACNSIGIWNGSLKAELRTIEKVEAEKTRVFTASPITSLFAMKFYV
FT DDFNKKFYATNLKAPHTVGINKFSRGWEMLHDKLNRPGWLHGSGDGSRFDSSIDPFFFD
FT IIKEIRKHFLPVEHHRAIDLIYDEILNTNICLANGMVIRKNVGNNSGQPSTVVDNTLVL
FT MVSFLYAYIHKTGDHMLKKLNDRFVFVCNGDDNKFAISPEFDAEFGHDFSPELTELGLT
FT YEFDDITDDMCANPYMSLTMVRTPFGIGFSLPVERIVAIMQWAKKGGVLHSYLAGISAI
FT YESFNTPKLFKSVYAYLLWLTEEHGSDILAAMTGTETALPIPSMLDVYRLHYGDSSIEL
FT QAADTQTDAQKEEARLAAATKKAADDADAARLRKVEADRVEAARVKKASDDKKARDLTA
FT TKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKLRISMDKLKSAPKSIIEHNNS
FT IALDSEVKKWSDAVRTSLGITTDEAWINALIPFLGWCANSGASDKHAENQTMQVDNGTG
FT ALTEMSLSPFTVHARLNGGLRRILRAYSDETVLLLQEHKIVTKWAMKHGASAHAAYAFD
FT FFVPRPWMNPQDIEVAKQARLAALGTGTYNTMLTSDTTNLRKTTNRRVLDTDGHPELT"
FT mat_peptide 163. .1143
FT /product="P3 protein"
FT mat_peptide 1144. .1341
FT /product="7kDa protein"
FT mat_peptide 1342. .3318
FT /product="cylindrical inclusion protein"
FT mat_peptide 3319. .3690
FT /product="14kDa protein"
FT mat_peptide 3691. .4251
FT /product="NIa-VPg protein"
FT mat_peptide 4252. .4911
FT /product="NIa-Pro protease"
FT mat_peptide 4912. .6495
FT /product="NIb polymerase"
FT mat_peptide 6496. .7374
FT /product="coat protein"
FT 3'UTR 7378. .7635
XX
SQ Sequence 7635 BP; 2179 A; 2017 C; 1668 G; 1771 T; 0 other;
AJ131981 Length: 7635 December 21, 2001 15:36 Type: N Check: 7754 ..
1 aaaataaaac caccacagac caaaactatc aaaacgatca caagccaaca
51 cataccttct gcttcctttt gagcccaagc tttcgtctct cactcccctt
101 gcgacgcctc actctttcca atcgagccct tcgcctctgc cttcttcttc
151 actcccttcg agatggagca gacagcagcc cagaccgccg cgcgctacgc
201 cacacacacg aactccgcac aagagcagcc tcctgtcagc cctatgaatc
251 tgtctgcaaa ctttgttgcc cctgagcttt tctacgcttc aaatgtcgag
301 aagatcaaga gtatcataag gatgcgtagc acgacgcgca tcattgatgc
351 gatatccagg gatttcgaac ttgttgcttt tctcatactc agccccgcac
401 atctcatgca gctagaaacc acactacgct gcgagatgag atccagcatt
451 gtacctattg caaactcaga tgctggtttt gagacttgcg ccgtcctcaa
501 aacagcgctc gatggaatga agtatcactt tggaacaacc acactcgagc
551 aaggctggac atccatgatg agacacgctg acagctgcct gcaagagagt
601 tcttcctctg ccgtcgccat gttacaaact caagtccaga aagtcggctc
651 cctcttaatc agcggaaaaa atcgcgtaga aagttgcgaa ctttatgtct
701 tacacctcac cgcgcgcgct ttcaggaccg aatatggatt aaagggtact
751 tgctttggag aacactgcgc tttgctgcac gacttaaaag catgcatttg
801 tggtaccgtg ccaaaagagt ttttgtgggc gaaaaccaaa aagcactcca
851 tgttcactat cccagagtgg atcgcacgta cgccaacaga ctgtttcatg
901 ctgtgtcttc gcgctatacc tatctttcgt aggtgcacga tggcaatgtc
951 tttactttat tggtcgtgtg tagcaactgt taacttccct tctgttatgg
1001 cttttctttt taagcgtcag ttcactaaat acatagccca ttccttcgcc
1051 aagcactcca tctatttcct tatgttaggt attgtagccc tactatgggc
1101 attccgcact tatgcttcga aaaacccaaa aatagctctc caagctagga
1151 gcgcaaacga aaaggaaaag aaactgatga tgttactcgc aagcgccgtt
1201 ggaatcacat atctatttga ctacgacatc gcagaagccc tagggaattc
1251 tctccataaa ataagtcgct tgtcgtctta tctaatggat gatcatcaag
1301 gagtagcctc tcgcatgttt agcgctagct acggacttca agctggggac
1351 aatacggagg atgcagtcac cacaatcatt agtgatctct tgtctgtcac
1401 ctttcaaatt gtcgaagaag atacaactgc tggagtttta gaagaggtca
1451 gcgacacaac tttcagtagt tgggttagcg ttaacactat ctctggaagg
1501 aacatgtcac gccccctgca ataccctgtg aatcagactt acccactcac
1551 accaatgaac gttttgctgc aagctcaagc tatggtcgat tcggacaact
1601 gttggtcaat ggtcgttgga cacacgggat ctggaaaatc cacgtatctt
1651 cctgttcagt actctaacta ccttgccaag aaacttgacc gtcgccaaca
1701 aattctagtt tgcgagccta cgcaagcagc cacagagaat gtctgctcag
1751 gaattgctgc caacttaggg agagctgtgt atggaagaca tgaaggttgg
1801 tcgcgcatgg gagatcactg cattcaagtt atgacctacg gatcagctct
1851 acagtgccac gcaatggatc caggcttcat atcaaccttt gacgcaatat
1901 tccttgatga agctcacgat gtcaaagaac attcacttgt cttcgaaagc
1951 atctgcaaca acttcaagtc tgttagaaag ttctacgtat cagcaacccc
2001 ccgagatggc agttcatgcc cggatgcaac acgcaaattc cctctaacag
2051 ttcagcagag tgtgtgcgat tcatataaga aattcatagc tgcacagggt
2101 ggagacgatc ttctcgacgt cactaaatac gacaccgttc ttgtttttct
2151 tgctggaaga ccagaatgcg tcaaagctgc aaatgcatgg aatgctagca
2201 tcactggaga aaagcgagct ttctcgctat caagcgacaa cttcgccacc
2251 gattttgcaa tgctaacgga gcgcctcaaa acgcacaaaa ccatcatctt
2301 cacaacgaac atcatcgaaa ctggtgttac ccttagcgtt gactgtgttg
2351 ttgactttgg ctataccatg cgaccctccc tcgatctaaa ccacaaaaca
2401 ctacgtcttg agcgccgtag agtgactgca aatgagagaa agcaaaggat
2451 tggtagagct gggcgtctca aggaaggaca tgccattgtg tgtggtgatg
2501 aagatcgatc tgtcaatgtc gtctccccgg atgttctgta tggtgccgcg
2551 cttcttagct tcaagcacaa tgtgcccttc tacatgaacg acacctttga
2601 aagctcgtgg cttgaaggaa ttactaagtc tcaggctgac actatgacaa
2651 ttttcaagct ccccatattc ctaacgcgcg atcttgttaa ctccgacggc
2701 tctgtagtca aggagtttct tgacattctg aagaagcacc agttcacaac
2751 gagcgacatc aagcaagcgc cacacagcat agctcgtcac ctctttccaa
2801 cttgggcctc atactttgca ctctttcaat caatcaacta tggagaggag
2851 aaagacgaga tccccagcaa ccttcgccat gcgcgagttc ccttctccat
2901 ttcgacgctg tctaaattcg actggaatgc cttggcgctt gcatgtgagc
2951 agcatcgccc aacagtgata agctcattcc aaggccttga tcagccagcc
3001 cgcgttgtca ccctacaaac aaactctgca aacatcctcg gaagcatcgc
3051 ccatctctgc aacatgcgta acaattacaa agccttgatt gacagcaaca
3101 accatgtaaa gcaatcaatg gcaaccaacg ttatgttcaa gtggttctca
3151 tcaacccgca tcacagctga tcttgacaga aacttatcca aatgcttagc
3201 caacttgtca gttgtggaaa ccacgattag ctcgctaaag cagatttcag
3251 ctggaaactc gcaggtgatg gcttctccaa tacttcagag tcacctagag
3301 agcataatcg aactacaatc aaacgatatg ttgactgatg agacactgtc
3351 aaacgctcta ggcattttca acccaaagac caacctcttc ctccttctcg
3401 caaccaaagg ttttaaactt gtttacgtta tctgcctgct tatattaata
3451 aacctcatct accgcttgct ctcccactgg agagcttggt tgaagagcaa
3501 gaacgataac gtgaactccg atgccctcac caacaccatg acagttcagg
3551 aaggaagcga aattctcaag gaagtattga agatgactcc agcgatgcgc
3601 agggaggtga ccaaggacat gaaagttgca gttgctgata acaacagcac
3651 attctctttc gtgttccccg acgaacacat tgacctcgag ggaaagggaa
3701 acaagtatcg accacgagag gacgcacgtc tgatgtactc cacgagagac
3751 gacgcaacct tcgatacatg gaacgagaaa gctaaggaga aaaggaagaa
3801 gatatcagac cgcgcagagc cagagatgaa acaaccttac cagaagcgtc
3851 catactataa cttctacgac cttcaaactg atagcaacat tctcgaggca
3901 atattctaca ccacggaagg tgacgaattc ttccggacgg caaatcccaa
3951 caaggacatg cactcagtag ctgaaaaact aaaagccttc cttgacacaa
4001 aaccaatcat aggcagacac cagcgccagc tccttgagga aaccgctcag
4051 gtcgttatca aagacgacaa aggcactgcc cacagaatgg acatatcaac
4101 tcacaaccct aacactctta agaacaatgg atcaggaaga gttgggtatg
4151 atgagcatcg cggcgatttc aggcaagaga gccctgcact tgagtcaccg
4201 tacgagttgg aagctgaatt cggaaactca aaggatgaag tcatgcttga
4251 agcatcaaca ggaattctcc tatcccaggt cagcgttgat gttgcgactc
4301 gaattggaag aataagcatc ggaacgttca atgtcaattg cttcctctac
4351 agtgattgga tactagcacc tgctcatttt caggatcgaa acggcgccgt
4401 caccatcgaa ttcccagatc aaacggtgag taccacaacc gacaatttaa
4451 atgcgcacgg tgtcaagcga ttttacggac ttgacctcat agccattcga
4501 agaccaccaa gcctccgacc tgagaaaaag ctcgttaaag cgttcgccat
4551 cacagagcca gtgctagcac agatggtctt cattgacagc caagggatcc
4601 gaaagttttc tcaatccgac tggatcagac aggaagctgg ctctaacaga
4651 tggtcacaca agatttcaac tcaaaatggg atgtgtggat gccctgttct
4701 ggatgttgga aagaaccgtc tcattggaat tcacgttgcc acgaaccgca
4751 ccacaggacg aaatgaattc cagcccttca cacgcgaggc tgtcgacttc
4801 atcaacgggc caggaaacaa ggttcctttc agcccttgga tctttaaccg
4851 ccccgcctgt ggatacaagc aaggagaagc caccttcgct tcacgcacca
4901 tacagaacca agcctccgac actctcagca agatcaacaa ctccgtcctc
4951 ggctttggaa gtgatttgaa aggccagctt gttcaacccg taacaccagc
5001 tctacgcact cgctttgaag ccctgtttgg tggtggaagc ttcgaactcg
5051 tcggaacaat gaacaaagga ctcatagaca aacacacaat tgttggggag
5101 aacgacaacg ttcatgattt catgagagag caccccactt ttgcttggct
5151 tcagggtttc atggacgaat acgcaccaag tgtcttgaac tactcggctt
5201 actacaagga tctttgcaag tacaatagga agaagcacca actctccttt
5251 agccctcacg agcttcggag tgccaccgct ggaatgatca gaatgttgga
5301 agacgccggc ctaactcaag gcgacgtgag gacaccccaa caggttgttt
5351 cagacatgca gtggaacact tccgccggac caagctacca gggcaagaaa
5401 agagacgttt gcgcacatct cagcgagcag gaagttctac accttgcaga
5451 aacgtcgcga cagcagtttc tagcctgcaa ttccatcggc atttggaacg
5501 gatcgctcaa agcagagctt aggacgattg agaaagtgga agctgagaaa
5551 accagagttt tcacggcttc gccaatcacg agtctattcg ccatgaagtt
5601 ctacgttgac gatttcaaca agaagttcta tgcgacaaac ctgaaagccc
5651 cacacacggt aggaattaac aaatttagca gaggctggga aatgctccac
5701 gacaagctca accgcccagg ttggcttcac ggcagtggcg atgggtcacg
5751 atttgatagt tcaattgacc ctttcttctt cgacataatc aaggagattc
5801 gaaagcactt tctaccagtt gagcaccatc gcgcaatcga cctaatatac
5851 gacgagattc tcaacaccaa catttgtttg gcaaatggca tggtgattcg
5901 aaagaacgtt gggaataaca gcgggcagcc aagcacggtc gtagacaaca
5951 cacttgttct catggtctct tttctctacg cttacattca taaaaccgga
6001 gaccatatgc tcaagaaact caacgacaga tttgttttcg tctgcaatgg
6051 tgacgacaac aaatttgcca tttccccaga attcgacgcc gagttcggtc
6101 acgacttttc accggagctc acagagctag gtttgacgta cgagtttgac
6151 gacataacag atgacatgtg tgcaaacccc tacatgtccc tgaccatggt
6201 ccgcactccc tttggaattg ggttctcttt gcccgtggaa cgcattgtag
6251 caataatgca gtgggctaag aagggcggcg ttctgcactc ttacttggca
6301 ggaatctcag ccatttacga aagcttcaac acaccaaagt tgttcaaatc
6351 agtctatgcg tatttgttat ggctgacaga ggaacacggc tctgacatcc
6401 tagctgcaat gaccggaaca gagacagctc tcccaattcc ttccatgctc
6451 gatgtgtacc gcctccacta tggtgatagc agcattgagc tccaagcagc
6501 tgacacacaa acagacgcgc agaaggagga agcacgactg gcagccgcca
6551 ccaagaaggc agccgatgat gccgacgctg cgcgtctccg caaggttgag
6601 gcagatcgtg ttgaggccgc aagagtgaag aaagcgagcg atgataagaa
6651 agccagggac ctcacagcaa ccaaggttga tgatggcaaa attgttgccg
6701 acgctggaac aaaaaggacc aatgccgcca ccaaagagaa atggtcactt
6751 ccagaaacaa aacccgtcaa cgcaggacta aagcttcgaa tctcaatgga
6801 caaattaaag agcgcaccca aatctataat cgaacacaac aactccatcg
6851 ctctagattc agaagttaag aagtggtcag acgctgtgcg gaccagtctt
6901 ggcatcacca cggatgaggc atggatcaat gccctcattc ccttcctcgg
6951 atggtgcgcc aacagtggcg cttcagacaa acacgcagaa aaccagacca
7001 tgcaagttga taatggaact ggagctttaa ccgagatgag tctctcccca
7051 ttcactgttc acgctaggtt gaatggtggc ttgagacgga tcctgcgagc
7101 ctacagtgac gaaactgtgc tcctccttca ggaacacaag attgtcacaa
7151 aatgggctat gaaacacggc gcatctgcac acgccgcgta cgcttttgac
7201 ttctttgtcc cccgcccgtg gatgaaccca caggacatcg aagttgcgaa
7251 acaagcacgt cttgctgctt taggcacagg tacatacaat accatgctca
7301 cctccgacac aaccaacctc cgcaagacaa ccaaccgcag ggttctggat
7351 actgatggac acccagaact aacctaaacc atcacccccc tccgcctttt
7401 atatttgcac tctaaatttt cgcaaaccat caccaccttt cacggccacg
7451 gttacgatct ttaatttctg cacttgtatc aggctcggga cggtttcatg
7501 cacaatatgt cttcgacagt tgccaaacca gtattttcca cgaggaagag
7551 tatggcgagg cttgagcagc cgtttttaat catacgtcgt tgtatggtgg
7601 cgcattcagt gcgtttacga gtaccagaag gtaat