Sequence of DPV Faba bean necrotic yellows virus
faba bean necrotic yellows virus C2-Eg gene, isolate Egyptian EV1-93
ACC No: AJ132180
Dated: 2000-09-16 | Length: 1003 | CRC: -851282913
!!NA_SEQUENCE 1.0
ID FBE132180 standard; circular DNA; VRL; 1003 BP.
XX
AC AJ132180;
XX
SV AJ132180.1
XX
DT 02-JUN-1999 (Rel. 59, Created)
DT 16-SEP-2000 (Rel. 65, Last updated, Version 2)
XX
DE faba bean necrotic yellows virus C2-Eg gene, isolate Egyptian EV1-93
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KW C2-Eg gene; rep protein.
XX
OS faba bean necrotic yellows virus
OC Viruses; ssDNA viruses; Nanovirus.
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RN [1]
RP 1-1003
RA Katul L.;
RT ;
RL Submitted (09-JAN-1999) to the EMBL/GenBank/DDBJ databases.
RL Katul L., Inst. f. Pflanzenvirologie, Mikrobiol., u. biol. Sicherheit,
RL Biologische Bundesanstalt f. Land- u. Forstwirtschaft, Messeweg 11 -12,
RL 38104 Braunschweig, GERMANY.
XX
RN [2]
RA Katul L., Timchenko T, Gronenborn B., Vetten H.J.;
RT "Ten distinct circular ssDNA components, four of which encode putative
RT replication-associated proteins, are associated with the faba bean necrotic
RT yellows virus genome.";
RL J. Gen. Virol. 79:3101-3109(1998).
XX
RN [4]
RA Timchenko T, de Kouchkovsky F., Katul L., David C., Vetten H.J.,
RA Gronenborn B.;
RT "A single Rep protein initiates replication of multiple genome components
RT of faba bean necrotic yellows virus, a single-stranded DNA virus of
RT plants";
RL J. Virol. 73:10173-10182(1999).
XX
DR SPTREMBL; Q9WIJ5; Q9WIJ5.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1003
FT /db_xref="taxon:59817"
FT /virion
FT /organism="faba bean necrotic yellows virus"
FT /lab_host="Vicia faba"
FT /isolate="Egyptian EV1-93"
FT stem_loop 1. .33
FT TATA_signal 75. .80
FT /gene="C2-Eg"
FT polyA_signal 113. .118
FT /gene="C2-Eg"
FT CDS 121. .981
FT /db_xref="SPTREMBL:Q9WIJ5"
FT /evidence=EXPERIMENTAL
FT /note="33.23 kDa"
FT /gene="C2-Eg"
FT /product="Rep protein"
FT /function="replication-associated protein"
FT /protein_id="CAB44020.1"
FT /translation="MARQVICWCFTLNNPLSPLSLHDSMKYLVYQTEQGEAGNIHFQGY
FT IEMKKRTSLAGMKKLIPGAHFEKRRGTQGEARAYSMKEDPRLEGPWEYEEFVPTIEDKL
FT REVMNDMKITGKRPIEYIEECCNTYDKSASTLREFRGELKKKKAISSWELQRKPWMDEV
FT DALLQERDGRRIIWVYGPQGGEGKTSYAKHLVKTRDAFYSTGGKTADIAFAWDHQELVL
FT FDFPRSFEEYVNYGVIEQLKNGIIQSGKYQSVIKYSDYVEVIVFANFTPRSGMFSEDRI
FT VYVYA"
XX
SQ Sequence 1003 BP; 303 A; 157 C; 248 G; 295 T; 0 other;
AJ132180 Length: 1003 December 21, 2001 15:36 Type: N Check: 7323 ..
1 ctggggcggg gcttagtatt acccccgccc caggttcagc ggagtcatca
51 cgtggattac acgtgatatt agtctatata tagctcaagt tgtaatattt
101 tatcattcat tgaataaaat atggctcggc aagttatatg ctggtgcttt
151 acattaaata atcctctctc tcctctttct cttcatgatt caatgaagta
201 tcttgtttat caaactgaac aaggtgaagc tggaaatatt catttccagg
251 gttatattga aatgaagaag cgtacatctc ttgctggtat gaagaaatta
301 attccaggtg ctcattttga aaagaggaga ggtactcaag gagaagctag
351 agcttattca atgaaagaag atccaaggct tgaaggtcca tgggagtatg
401 aagagttcgt tcccaccatt gaagataagc tcagagaagt tatgaatgat
451 atgaagatta caggtaagag acctattgag tacatcgaag agtgctgtaa
501 cacgtatgat aaatctgcaa gtactttaag agagttcaga ggtgaattga
551 agaagaagaa ggctatttcc agttgggagt tgcagaggaa gccatggatg
601 gatgaggtag atgctttgct tcaggagaga gatggaagac gaatcatttg
651 ggtttatggc ccacaaggtg gagaagggaa aacctcttac gctaagcatc
701 tcgtaaagac gcgtgatgct ttttattcga caggtggaaa gacagccgac
751 attgcttttg cttgggacca ccaagagtta gtgctcttcg actttccacg
801 aagcttcgag gagtatgtta attacggagt aattgagcaa ttaaagaatg
851 gtattattca atccggaaag tatcaaagtg taattaaata tagtgattac
901 gttgaggtta ttgtatttgc taattttact ccgcgaagcg gtatgtttag
951 tgaggatagg attgtctatg tatatgcgtg acgtcatgtg atcccttgct
1001 gag