Sequence of DPV Barley yellow mosaic virus
Barley yellow mosaic virus, Chinese (Yancheng) genomic segment RNA2 complete sequence
ACC No: AJ132269
Dated: 2003-01-28 | Length: 3582 | CRC: -2144964318
!!NA_SEQUENCE 1.0
ID BYE132269 standard; RNA; VRL; 3582 BP.
XX
AC AJ132269;
XX
SV AJ132269.1
XX
DT 28-JAN-1999 (Rel. 58, Created)
DT 28-JAN-2003 (Rel. 74, Last updated, Version 5)
XX
DE Barley yellow mosaic virus, Chinese (Yancheng) genomic segment RNA2
DE complete sequence
XX
KW P1 protein; P2 protein; polyprotein.
XX
OS Barley yellow mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Bymovirus.
XX
RN [1]
RP 1-3582
RA Adams M.J.;
RT ;
RL Submitted (27-JAN-1999) to the EMBL/GenBank/DDBJ databases.
RL Adams M.J., Crop and Disease Management, IACR-Rothamsted, Harpenden, Herts,
RL AL5 2JQ, UK.
XX
RN [2]
RA Chen J., Shi N., Chen J., Adams M.J.;
RT "Molecular analysis of barley yellow mosaic virus isolates from China";
RL Unpublished.
XX
RN [3]
RA Chen J., Shi N., Chen Y., Diao A., Chen D., Wilson M.A., Antoniw J.F.,
RA Adams M.J.;
RT "Molecular analysis of barley yellow mosaic virus isolates from China";
RL Virus Res. 64:13-21(1999).
XX
DR SPTREMBL; Q9YJW2; Q9YJW2.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3582
FT /country="China"
FT /db_xref="taxon:12465"
FT /virion
FT /organism="Barley yellow mosaic virus"
FT /isolate="Yancheng"
FT /specific_host="barley"
FT /segment="RNA2"
FT 5'UTR 1. .154
FT CDS 155. .2827
FT /db_xref="SPTREMBL:Q9YJW2"
FT /product="polyprotein"
FT /protein_id="CAA10638.1"
FT /translation="MSASSSRLLFDCGSLDWPNKSLFGDPTTRDVMNEHISSTWNAVIR
FT RHMLAPNANAETILGRDGLPSAQFDAYGAMLPSFIQALNAPTTRLRISAPLSTAESILC
FT ADASHAPWLYMANSVCAYEATHLQPVQTFIAFNFAHGYCYLSLFIPLSFRITFENARGF
FT SRFLEQLPDILGAYPTLAAIYKTMLFAIRLFPEVLQAPIPIIAKRPGVLQFHVSDARGL
FT PPSWFPMKCGSVASFVALITNNLNSDLLNGIVGSNGDGEHYTNWNSGHDHWIVNRFITV
FT KDLHSSLKSALEVDLDTEGGRNAVLDLLLDLGVTNLVRREKRFPAYFQGAESVYLLLSC
FT ERVGNELVAVQDALQEPLANYSGLDLRALIINLGGLPSRHSDICYTRNIFENDNHLVWN
FT FEFYRIASITKNAQIDRDVLSSSMANLFSDFVSESSNGQYRVKEPRPVVQYRVEHDEPV
FT ASSAPSAWWQVLIGITTAILGAIIFFLWRCFLRAKRVKFQAKDSFPWFTTSGDDDSPPP
FT PGDSPSRPPGRSPDRVLPRTVVRDLSFNDDDDLHSVDLNEAGSRFGEVVSLIARGNLRE
FT LAGAIPESLSNLTLLQTSASGSGFYTMVALYLATLGDAITAFHEHNDASPATIQSLRTL
FT ELQLEARGLRFNEAGTPANLIQRGVNSSVGRALVRLTQSALLATGENFRTRMATTLERI
FT AAERLNTLTAYDQRVIEMTTELLAAIKPVLEVERSELTPHLANAEALLQVYNNLFSTDY
FT VSASLLALRREMILRSAEGRVGEQPTSASDAANEELVQRSMTKLDKEIELFQAQIDSQR
FT RAVTITEASNLRENILQPINTVANIAMAGAFLRGGARHRMPGMPDVATPMPNPFRAFSG
FT RGHSLTTTRSGGLFRRPRV"
FT mat_peptide 155. .919
FT /product="P1 protein"
FT mat_peptide 920. .2824
FT /product="P2 protein"
FT 3'UTR 2828. .3582
XX
SQ Sequence 3582 BP; 922 A; 918 C; 778 G; 964 T; 0 other;
AJ132269 Length: 3582 February 4, 2003 13:32 Type: N Check: 6379 ..
1 aaaataaaac aaccctaaac caaacaaaac aaaacaaaac aaacacaaac
51 atcacacgct ccccaagctc acaatacttg tagagtgatt tctgtcatcc
101 tactgtttgc aagctttcca acaaatcaac ccgctcgctt tcaaaccctc
151 catcatgtct gcttctagtt cacgcttact cttcgactgt ggcagtcttg
201 actggccaaa taagagctta tttggcgatc ccacaacgcg agatgtcatg
251 aacgaacaca tttccagcac gtggaatgcg gttattagaa ggcacatgtt
301 ggcgcccaat gccaacgccg agactatatt gggccgtgat ggtttgccat
351 ctgctcaatt tgacgcgtat ggagccatgc tacccagctt cattcaagct
401 ctaaatgcac ctacaacgcg tctccgaatc agcgcaccgc tgtccaccgc
451 tgagtccatc ttgtgcgctg atgcatccca cgccccttgg ttgtacatgg
501 caaacagtgt gtgcgcatac gaagcaactc atctgcagcc tgtacaaact
551 ttcatcgctt tcaacttcgc gcatggctat tgttacctca gtctcttcat
601 accactaagc tttcgcatta ccttcgagaa tgctcgaggt ttcagtcggt
651 ttctcgagca gcttcctgat attttaggtg cgtatccaac attggctgca
701 atatataaaa caatgctatt tgctattagg cttttcccag aggtgctaca
751 agctccaatt cccatcatcg caaaaaggcc tggcgtactc caattccacg
801 ttagtgatgc cagagggcta ccaccctcat ggttccccat gaagtgtggc
851 agcgtagcat ctttcgtagc actcatcacc aacaacctga acagcgattt
901 gcttaatgga attgttggtt caaatggtga tggcgagcac tacacaaatt
951 ggaactctgg acatgatcac tggattgtga atcgattcat aacagtcaaa
1001 gatttgcaca gcagcttaaa gtcagctctg gaggttgatt tggacacaga
1051 gggcgggcga aatgccgttc tcgatttgct tctagatctt ggggttacta
1101 atctcgttcg aagagagaaa cgcttcccag catactttca aggagctgaa
1151 agcgtatatc tacttctatc gtgcgagaga gttgggaacg agttagtagc
1201 cgtgcaagat gccctgcagg aaccattggc taactattct ggcttagatt
1251 tgagagctct catcatcaat cttggcggtt taccaagcag acactctgat
1301 atttgctaca cacgcaacat ttttgaaaac gataatcatc tggtttggaa
1351 ctttgagttc taccggatag cctcaatcac gaagaatgca caaattgaca
1401 gagacgtgct gagctcatcc atggcgaact tgtttagcga ctttgtttca
1451 gagtcgtcaa atggtcagta cagagtcaaa gaaccaagac ctgttgttca
1501 gtacagggtt gagcacgatg aaccagttgc tagtagtgcc ccatctgctt
1551 ggtggcaagt tcttattggc atcaccactg cgatccttgg cgcaataata
1601 ttctttctct ggaggtgttt cttacgtgct aagcgtgtga aattccaggc
1651 aaaggactcc ttcccatggt ttaccacatc tggtgatgat gactcaccgc
1701 ctccccccgg cgattccccg tcgcgccctc ctggacgcag cccagatcga
1751 gttcttccgc gcacagttgt tcgagatctt agcttcaatg acgatgatga
1801 cttacacagc gttgatctca acgaagctgg atcgcgtttt ggggaggttg
1851 tctctttgat tgcaagggga aatcttcgcg agttagctgg tgcaattcct
1901 gaatctctca gcaacctaac cctccttcaa acgagtgcaa gtgggtcagg
1951 tttttatact atggtggctt tgtaccttgc cactttgggg gatgccatca
2001 ctgcatttca tgagcacaat gatgcctcac ctgccacaat tcaatcactg
2051 cgaacgctcg aacttcagct tgaagcccgt gggttgcgtt tcaatgaagc
2101 tggtacaccc gcaaatctta ttcagagggg cgttaattcc tctgttggca
2151 gagcacttgt gcgactgaca cagagtgctc tcttagctac tggtgagaac
2201 tttcggacac gcatggcaac cacacttgaa agaattgctg ctgagcgtct
2251 taacacatta accgcttatg atcagcgagt tattgaaatg acaactgagc
2301 tcctagcagc gattaaaccg gttcttgagg ttgagcgcag tgaactcact
2351 ccacatctgg caaacgccga ggctttgctt caagtttaca ataacctctt
2401 cagcaccgat tacgtttcag catcgctgct cgctcttaga cgcgagatga
2451 ttctcaggag tgctgaaggg cgtgttggag aacagcccac tagtgcttct
2501 gacgctgcta atgaggagtt ggttcaacgt tccatgacaa aattggataa
2551 ggaaatcgag ttgttccagg cacaaattga tagccagcgc cgcgccgtca
2601 ccataactga agcatccaat ctcagagaaa atatattgca gccaatcaac
2651 actgtcgcaa atattgctat ggctggagct tttctgcgtg ggggcgcgcg
2701 tcatcgcatg ccaggaatgc cagacgtagc tacgcccatg cccaaccctt
2751 ttcgagcttt ctcagggagg ggacattcac tcacgacaac tcgaagtggc
2801 ggtcttttcc ggcgccctcg agtctagaat tctcatcaca gcagcattta
2851 ctttccatcg ccttagaata gtttagatca acatcatcca tttctctatc
2901 ctttcgccat ctgcacacca ttgccattaa tatggtagag ttagcaattc
2951 atcccttgct acgctcaaaa tctccatctt tagaccacct gcaaacacac
3001 aaaataccaa aaataccatt tatcattctg tctcaaacgc cagcatttta
3051 aattacccgc aattgcatta tcgtttcgcc atcaaagtat ggttcgtttc
3101 atcaacatct gctcgcacga ttgggtgtat ggggccagtg ttgtttcggg
3151 tatggaattc aaatggtaag aaatttattc ttctcaccat gagtttttca
3201 ggggataagt tcggtgctac agctagcggc tgtatcctta acgatgcccc
3251 acaccacgaa acaccattga ttcttcggaa ttagcctttc aaatatccca
3301 actgcaatga gcacgatagc attgcatctc cactcaaggt ccggttagag
3351 tccctggcag gtgtgggcta caggagcatg ggaatgcttc tctgtcacca
3401 tctgtcgtct gcggcctcta tctagcacta cgagtggagc cacgtcttta
3451 aatccccagc atgtttactt tatgttctgc atagaaaacg tcacatctgt
3501 gatacaaaaa catgcaacac gtgcccatca tcggtcgcgg gttgtagtct
3551 gatgaacaac aactttgtac acaggaaatg tg