Sequence of DPV Barley yellow mosaic virus

Barley yellow mosaic virus coat protein, Funing (Shizhuang) isolate

ACC No: AJ224625

Dated: 1999-11-03 | Length: 895 | CRC: 196145748

                !!NA_SEQUENCE 1.0
ID   BYM224625  standard; RNA; VRL; 895 BP.
XX
AC   AJ224625;
XX
SV   AJ224625.1
XX
DT   25-FEB-1998 (Rel. 54, Created)
DT   03-NOV-1999 (Rel. 61, Last updated, Version 3)
XX
DE   Barley yellow mosaic virus coat protein, Funing (Shizhuang) isolate
XX
KW   coat protein.
XX
OS   Barley yellow mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Bymovirus.
XX
RN   [1]
RP   1-895
RA   Adams M.J.;
RT   ;
RL   Submitted (23-FEB-1998) to the EMBL/GenBank/DDBJ databases.
RL   Adams M.J., Crop and Disease Management Department, IACR-Rothamsted,
RL   Harpenden, Herts, AL5 2JQ, UK.
XX
RN   [2]
RA   Shi N., Chen J., Adams M.J., Zhu F., Wang Z., Wilson T.M.A.,
RA   MacFarlane S.A., Antoniw J.F.;
RT   "Strain differences between isolates of barley yellow mosaic virus in
RT   China";
RL   (in) Sherwood J.L., Rush C.M. (eds.);
RL   PROCEEDINGS OF THE THIRD SYMPOSIUM OF THE INTERNATIONAL WORKING GROUP ON
RL   PLANT VIRUSES WITH FUNGAL VECTORS:41-44;
RL   American Society of Sugar Beet Technologists, Denver (1996)
XX
RN   [3]
RA   Chen J., Shi N., Chen Y., Diao A., Chen D., Wilson M.A., Antoniw J.F.,
RA   Adams M.J.;
RT   "Molecular analysis of barley yellow mosaic virus isolates from China";
RL   Virus Res. 64:13-21(1999).
XX
DR   SPTREMBL; O56797; O56797.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .895
FT                   /chromosome="RNA1"
FT                   /db_xref="taxon:12465"
FT                   /sequenced_mol="cDNA to genomic RNA"
FT                   /virion
FT                   /organism="Barley yellow mosaic virus"
FT                   /isolate="Funing, China"
FT   CDS             <1. .894
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:O56797"
FT                   /product="coat protein"
FT                   /protein_id="CAA12037.1"
FT                   /translation="AADPLTDAQKEDARIAAADKARFELADADRRRKVEADRVEAARVK
FT                   KAADAALKPVNLTATRMPTEDDGKLKTPSGARIPSSAADGNWSVPATKQVNSGLTLKIP
FT                   LNKLKSVPKSVMEHNNSVALESELKAWTDAVRTSLGITTDEAWIDALIPFIGWCCNNGT
FT                   SDKHAENQVMQIDSGKGAVTEMSLSPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVA
FT                   HWSMKHGASANAKYAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRK
FT                   TTNHRVLDSDGHPELT"
FT   mat_peptide     1. .891
FT                   /product="coat protein"
XX
SQ   Sequence 895 BP; 282 A; 222 C; 201 G; 190 T; 0 other;

AJ224625  Length: 895  December 21, 2001 15:37  Type: N  Check: 6911  ..

       1  gctgctgatc ctctcactga tgcacaaaaa gaagatgcac gcattgctgc
      51  agctgataaa gcacgcttcg aactagccga tgctgatcgt agacgtaaag
     101  ttgaggccga ccgtgtggaa gcggcaagag tcaaaaaggc agctgatgct
     151  gcactaaaac cagttaacct cacagcaaca cgcatgccaa cagaagatga
     201  tggcaaactt aaaacaccat ctggcgctag aataccatca tcagctgcag
     251  atggtaactg gagcgtgcca gcaacgaagc aagttaactc tggtttgaca
     301  cttaaaattc ccctgaataa gctcaaaagt gtgcctaagt ctgttatgga
     351  gcataacaac tcagtcgcac tcgaatctga gctaaaagcc tggactgatg
     401  ctgtgcgcac aagtttaggc atcacaactg atgaggcatg gatcgatgcc
     451  ctcattccct tcatcggatg gtgctgcaac aatggcacct cagacaagca
     501  tgctgagaat caagtaatgc aaattgacag cggaaaggga gctgtcacag
     551  agatgagtct gtccccattt attgttcatg ctcgaatgaa tggtggactc
     601  cgaaggatca tgcgcaacta cagtgatgaa accgtcttac tcatcacaaa
     651  caacaaacta gttgcacatt ggtcaatgaa gcatggcgct tctgcaaacg
     701  caaaatacgc tttcgatttc ttcgtcccac gatcatggat gaacccacag
     751  gatatcgaag tgtcaaagca agcgcgctta gcagcacttg gaactggaac
     801  gtataacacc atgttaactt ccgacactac caatctgcgt aagacaacca
     851  accacagggt tctggactca gatggacacc cagaactaac ctaaa