Sequence of DPV Colombian datura virus
Colombian datura potyvirus partial mRNA for NIb polymerase and coat protein polyprotein, isolate CDV_Br1
ACC No: AJ237921
Dated: 1999-04-12 | Length: 1249 | CRC: 43915481
!!NA_SEQUENCE 1.0
ID CDA237921 standard; RNA; VRL; 1249 BP.
XX
AC AJ237921;
XX
SV AJ237921.1
XX
DT 12-APR-1999 (Rel. 59, Created)
DT 12-APR-1999 (Rel. 59, Last updated, Version 1)
XX
DE Colombian datura potyvirus partial mRNA for NIb polymerase and coat protein
DE polyprotein, isolate CDV_Br1
XX
KW coat protein; cp gene; NIb gene; NIb polymerase; polyprotein.
XX
OS Colombian datura potyvirus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus.
XX
RN [1]
RP 1-1249
RA Jelkmann W.;
RT ;
RL Submitted (31-MAR-1999) to the EMBL/GenBank/DDBJ databases.
RL Jelkmann W., Institute for Plant Protection in Fruit Crops, Fed. Biol. Res.
RL Centre for Agriculture and Forestry, Schwabenheimer Str. 101, D-69221
RL Dossenheim, GERMANY.
XX
RN [2]
RA Lesemann D., Vetten H.J., Jelkmann W.;
RT "Colombian datura potyvirus (CDV): Partial characterization and
RT re-identification of petunia flower mottle virus as an isolate of CDV";
RL Unpublished.
XX
DR SPTREMBL; Q9WID4; Q9WID4.
XX
FH Key Location/Qualifiers
FH
FT source 1. .1249
FT /country="Germany:Hannover"
FT /db_xref="taxon:91613"
FT /virion
FT /organism="Colombian datura potyvirus"
FT /isolate="CDV_Br1 (1989)"
FT /specific_host="Brugmansia sanguinea, Feuerwerk"
FT CDS <1. .1010
FT /codon_start=3
FT /db_xref="SPTREMBL:Q9WID4"
FT /product="polyprotein"
FT /protein_id="CAB40836.1"
FT /translation="ILEQAPYKQLAEEGRAPYLAETALRKLYLDAEPTELELLKYAGCI
FT RGDYDDSLASEDIYLQADKVDAGSNTQAGKNQSKEKDTSVVTTGERKDLVAKQDRDVNA
FT GSSGTFSVPRIKAIPTKMNLPKIKNKQVISLDHLLNYKPEQHDISNTRATHQQFEQWHN
FT RVRDAYEVTDEQMQIILNGLIVWCIENGTSPNIHGVWTMMDGEEQVEYALKPIIENAQP
FT TFRQIMAHFSDLAEAYIEMRNRDRAYMPRYGLQRNLTDMSLSRYAFDFYEVTPRTPTRA
FT REAHMQMKAAAIRNNTTKLFGLDGNVSTAEEDTERHTAQDVNRGMHTLLGVRQG"
FT mat_peptide <1. .185
FT /gene="NIb"
FT /product="NIb polymerase"
FT mat_peptide 186. .1007
FT /gene="CP"
FT /product="coat protein"
XX
SQ Sequence 1249 BP; 384 A; 256 C; 285 G; 324 T; 0 other;
AJ237921 Length: 1249 December 21, 2001 15:37 Type: N Check: 2320 ..
1 ggattctcga acaagcaccc tacaaacaac ttgctgaaga agggagagct
51 ccttacctag ctgaaactgc tctgcgcaag ttgtaccttg atgctgaacc
101 cactgaattg gaattgctta aatatgcagg gtgcatcaga ggtgattatg
151 atgatagctt ggcatctgaa gatatatatc tccaagctga taaagttgat
201 gccggtagta acacacaagc cggaaagaac cagtcaaaag aaaaagacac
251 aagtgttgtc acgactggag agagaaagga tcttgtcgct aaacaagatc
301 gagatgtgaa tgctggttct agtggaacct ttagtgtacc tcgcattaaa
351 gcaattccta ctaagatgaa cctacccaag atcaagaata aacaggttat
401 tagtctggac catctgctga actacaaacc agaacaacat gatatctcaa
451 acacaagggc cacacaccaa caatttgaac agtggcacaa tcgtgtacga
501 gatgcttatg aagttactga tgaacagatg cagataatct tgaatggatt
551 gatagtttgg tgtatcgaaa atggtacatc accaaacata catggtgtct
601 ggactatgat ggatggggag gaacaggttg agtatgcatt aaagcccatc
651 attgaaaatg ctcaacccac atttcgccaa ataatggcgc attttagcga
701 tctagcggag gcttatattg aaatgaggaa cagggatcgc gcctacatgc
751 cacgttacgg gctacagcgc aatcttactg acatgagtct gagccgctat
801 gcatttgact tttacgaggt tactccgcgg acgccaaccc gtgctcgtga
851 agctcatatg cagatgaaag ctgcagcaat tcgaaacaac acaacgaagt
901 tatttggttt ggatgggaat gtttcaactg ctgaagagga taccgaacgt
951 cacacggcac aagacgttaa cagaggtatg cacacattac ttggtgtgcg
1001 tcaaggttag aggttatctt tgctttctgc acttttaatt actatgtcta
1051 tatgtaatat gtttaacact gccactagcc aaccgttttg tctcgtgatt
1101 agtgaggttc gacctcgttc acattacaga agggcgttag tcagtactta
1151 catttcatat cttagtatgt actaaaagtg tctctctacg ttcacctttc
1201 agtcgcagtg aggttatacc tcggacacgg aagtggttca tagagcgag